RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SYNGR2O43760 224 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 HLA-DMBP28068 263 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 ZNF90Q03938 601 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 CNPY1Q3B7I2 92 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 HECTD4Q9Y4D8 3996 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 AMBPP02760 352 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 VAMP1P23763 118 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 ID3Q02535 119 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 SPANXN2Q5MJ10 180 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 TMED4Q7Z7H5 227 aa10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 RBM38Q9H0Z9 239 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-213ENST00000578044 ELOA3CA0A087WX78 387 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-213ENST00000578044 DEFB4AO15263 64 aa10.44□□□□□ -0.74
SMARCE1-213ENST00000578044 PPP1R1AQ13522 171 aa10.44□□□□□ -0.74
SMARCE1-213ENST00000578044 PBDC1Q9BVG4 233 aa10.44□□□□□ -0.74
SMARCE1-213ENST00000578044 NDUFB6O95139 128 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 GALR1P47211 349 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 OXA1LQ15070 435 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 C4orf46Q504U0 113 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 Q6ZTC4 211 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 TMEM144Q7Z5S9 345 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 S100A7AQ86SG5 101 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 RPP25LQ8N5L8 163 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 BPIFCQ8NFQ6 507 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 C7orf50Q9BRJ6 194 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 WDR12Q9GZL7 423 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 SRRQ9GZT4 340 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 XCL2Q9UBD3 114 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 RNF24Q9Y225 148 aa10.43□□□□□ -0.74
SMARCE1-213ENST00000578044 IGLL5B9A064 214 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 K7EPK0 472 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 PLP1P60201 277 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 LYZP61626 148 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 SELENOTP62341 195 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 OR1B1Q8NGR6 318 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 STRAPQ9Y3F4 350 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-213ENST00000578044 IGHV4-4A0A075B6R2 117 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 A0A0J9YX75 114 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 C9orf170A2RU37 121 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 ZNF98A6NK75 572 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 TAS2R30P59541 319 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 C12orf74Q32Q52 190 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 EBLN2Q6P2I7 272 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 COQ8AQ8NI60 647 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 CLEC5AQ9NY25 188 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 RFNGQ9Y644 331 aa10.41□□□□□ -0.74
SMARCE1-213ENST00000578044 DEDDO75618 318 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 IAPPP10997 89 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 B2MP61769 119 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 PSG9Q00887 426 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 PPP1R14BQ96C90 147 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 SMIM8Q96KF7 97 aa10.4□□□□□ -0.74
SMARCE1-213ENST00000578044 DEFB131BA0A096LNP1 70 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 WRBO00258 174 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 IFNA21P01568 189 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 HOXB5P09067 269 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 P0DMU3 169 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 FAM231AP0DMU4 169 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 FAM231CP0DMU5 169 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 PRR20EP86478 221 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 PRR20CP86479 221 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 PRR20DP86480 221 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 PRR20BP86481 221 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 PRR20AP86496 221 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 PXDC1Q5TGL8 231 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 TMEM147Q9BVK8 224 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 GGACTQ9BVM4 153 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
SMARCE1-213ENST00000578044 CCDC160A6NGH7 325 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 PMS2P5A8MQ11 134 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 CENPXA8MT69 81 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 OR4E1P0C645 316 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 DLK1P80370 383 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 OR2F1Q13607 317 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 SPANXN5Q5MJ07 72 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 LINC00336Q6ZUF6 198 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 ACOT7LQ6ZUV0 252 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 LINC00052Q96N35 136 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 DOK5Q9P104 306 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 CELA1Q9UNI1 258 aa10.38□□□□□ -0.75
SMARCE1-213ENST00000578044 TSC22D2O75157 780 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 RPL7P18124 248 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 INPP1P49441 399 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 AKR1C1Q04828 323 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 TRIQKQ629K1 86 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 C16orf92Q96LL3 132 aa10.37□□□□□ -0.75
SMARCE1-213ENST00000578044 IGF2BP2-AS1Q96M15 143 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms