RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PCTPQ9UKL6 214 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 HS3ST2Q9Y278 367 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 ARL2BPQ9Y2Y0 163 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 PHRF1Q9P1Y6 1649 aaKnown RBP0.37□□□□□ -2.35
TOP2A-202ENST00000577541 SCN8AQ9UQD0 1980 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 ZNF469Q96JG9 3925 aaPredicted RBP0.36□□□□□ -2.35
TOP2A-202ENST00000577541 TRBV6-7A0A0A0MS04 114 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 TMEM238C9JI98 176 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 NDUFB3O43676 98 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 CST8O60676 142 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 BANF1O75531 89 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 CD2P06729 351 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 BAALC-AS2P0C853 105 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 DYNLT3P51808 116 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 KRR1Q13601 381 aaKnown RBP0.36□□□□□ -2.35
TOP2A-202ENST00000577541 MSMO1Q15800 293 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 KRTAP26-1Q6PEX3 210 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 TEX261Q6UWH6 196 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 FAM19A2Q8N3H0 131 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 Q8N814 137 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 C12orf29Q8N999 325 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 OR2T10Q8NGZ9 312 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 FAM172AQ8WUF8 416 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 MIXL1Q9H2W2 232 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 NMNAT1Q9HAN9 279 aaPredicted RBP0.36□□□□□ -2.35
TOP2A-202ENST00000577541 TAF9BQ9HBM6 251 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 ACER3Q9NUN7 267 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 PRNDQ9UKY0 176 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 SLC35A3Q9Y2D2 325 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 U3KQ87 197 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 FMN1Q68DA7 1419 aa0.36□□□□□ -2.35
TOP2A-202ENST00000577541 FUOMA2VDF0 154 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 C7orf71A4D174 169 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 TLCD2A6NGC4 264 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 F8W036 122 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 CCL25O15444 150 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 HYPMO75409 117 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 KLF7O75840 302 aaPredicted RBP0.35□□□□□ -2.35
TOP2A-202ENST00000577541 ARPP19P56211 112 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 UBE2BP63146 152 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 SNCBQ16143 134 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 C22orf39Q6P5X5 142 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 TMEM14EPQ6UXP3 125 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 RPS19BP1Q86WX3 136 aaKnown RBP0.35□□□□□ -2.35
TOP2A-202ENST00000577541 LINC00471Q8N535 108 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 OR10K1Q8NGX5 313 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 GPX7Q96SL4 187 aaPredicted RBP0.35□□□□□ -2.35
TOP2A-202ENST00000577541 PHB2Q99623 299 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 PAIP2Q9BPZ3 127 aaKnown RBP0.35□□□□□ -2.35
TOP2A-202ENST00000577541 GINS3Q9BRX5 216 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 PSTPIP2Q9H939 334 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 KLK9Q9UKQ9 250 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 RNF11Q9Y3C5 154 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 EML6Q6ZMW3 1958 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 OBSL1O75147 1896 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 PLXNA4Q9HCM2 1894 aa0.35□□□□□ -2.35
TOP2A-202ENST00000577541 LAMB4A4D0S4 1761 aa0.34□□□□□ -2.35
TOP2A-202ENST00000577541 TAF1LQ8IZX4 1826 aa0.34□□□□□ -2.35
TOP2A-202ENST00000577541 DOCK4Q8N1I0 1966 aa0.34□□□□□ -2.35
TOP2A-202ENST00000577541 A0A087WX48 190 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 INE1O15225 51 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 ATG12O94817 140 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 DNAL4O96015 105 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 GLRXP35754 106 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 SRP14P37108 136 aaKnown RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 GNG10P50151 68 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 CRYBA4P53673 196 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 TAS2R41P59536 307 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 GNG3P63215 75 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 EIF5AP63241 154 aaKnown RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 BASP1P80723 227 aaKnown RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 LTC4SQ16873 150 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 CD109Q6YHK3 1445 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 ZNF833PQ6ZTB9 187 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 POP5Q969H6 163 aaKnown RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 ZHX1-C8orf76Q96EF9 292 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 BTF3L4Q96K17 158 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 CEP19Q96LK0 163 aa0.34□□□□□ -2.36
TOP2A-202ENST00000577541 SLC25A21Q9BQT8 299 aaPredicted RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 C6orf62Q9GZU0 229 aaPredicted RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 N4BP2Q86UW6 1770 aaPredicted RBP0.34□□□□□ -2.36
TOP2A-202ENST00000577541 EIF3AQ14152 1382 aaKnown RBP0.33□□□□□ -2.36
TOP2A-202ENST00000577541 RFX7Q2KHR2 1363 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 MGAMO43451 1857 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 NUP210LQ5VU65 1888 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 COL24A1Q17RW2 1714 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 TRBV6-4A0A1B0GX49 114 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 C9orf170A2RU37 121 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 C5orf67F2Z3F1 127 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 M0R2N4 97 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 CCL16O15467 120 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 IFNA7P01567 189 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 NFYBP25208 207 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 ARF6P62330 175 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 SPA17Q15506 151 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 LYRM7Q5U5X0 104 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 Q8N6K4 173 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 OR2T35Q8NGX2 323 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 LINC00052Q96N35 136 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 LYSMD1Q96S90 227 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms