RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SULT1A4P0DMN0 295 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 B2MP61769 119 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 ZNF90Q03938 601 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 MEF2DQ14814 521 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 MZT2AQ6P582 158 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 LGI3Q8N145 548 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 TMEM229BQ8NBD8 167 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 C15orf40Q8WUR7 153 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 SLC35E1Q96K37 410 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 C16orf92Q96LL3 132 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 ATP6V1G2O95670 118 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 ATP5G1P05496 136 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 TSPOP30536 169 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 GPX4P36969 197 aaPredicted RBP8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 GALR1P47211 349 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 ATP5G3P48201 142 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 ATP5IP56385 69 aaPredicted RBP8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 NCS1P62166 190 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 CLINT1Q14677 625 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 SURF2Q15527 256 aaPredicted RBP8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 GPR107Q5VW38 600 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 STEAP1BQ6NZ63 245 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR4C16Q8NGL9 310 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 DTD1Q8TEA8 209 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 AP3S1Q92572 193 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 TMEM56-RWDD3S4R434 201 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
CTDNEP1-212ENST00000576613 CRYM-AS1A6NIL9 109 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 A8MTW9 85 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 ZNF705GA8MUZ8 300 aaPredicted RBP8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 DUSP14O95147 198 aaKnown RBP8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 GAMTQ14353 236 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 IL22RA2Q969J5 263 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 EXTL2Q9UBQ6 330 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 HSPB7Q9UBY9 170 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
CTDNEP1-212ENST00000576613 IGKV1D-37A0A075B6S9 117 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 A0A087WXM4 84 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 M0R2Z0 102 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 CFDP00746 253 aaPredicted RBP8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 CCR6P51684 374 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 CNN1P51911 297 aaKnown RBP8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 VBP1P61758 197 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR2F1Q13607 317 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 SMCO1Q147U7 214 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 SPINK13Q1W4C9 94 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 GPR141Q7Z602 305 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR11H7Q8NGC8 314 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 KCNIP3Q9Y2W7 256 aa8.15□□□□□ -1.1
CTDNEP1-212ENST00000576613 CBY3A6NI87 242 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 DISC1C4P0D8 188 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 ZNF182P17025 639 aaPredicted RBP8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 S100A7P31151 101 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 SSBP1Q04837 148 aaKnown RBP8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 FAAP20Q6NZ36 180 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 SSX7Q7RTT5 188 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 RNF141Q8WVD5 230 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 GPR82Q96P67 336 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 TRGV9Q99603 122 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 RSG1Q9BU20 258 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 FUNDC2Q9BWH2 189 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 SLC25A32Q9H2D1 315 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 RBKSQ9H477 322 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 SLC25A22Q9H936 323 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
CTDNEP1-212ENST00000576613 CRXO43186 299 aaPredicted RBP8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 PRM2P04554 102 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 RAB11AP62491 216 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 MRPS10P82664 201 aaKnown RBP8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 GGNBP1Q5YKI7 109 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 BAP18Q8IXM2 172 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 OR4D5Q8NGN0 318 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 OR1B1Q8NGR6 318 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 PRRT1Q99946 306 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 Q9H8V8 135 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 GPR132Q9UNW8 380 aa8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 APOBP04114 4563 aaKnown RBP8.13□□□□□ -1.11
CTDNEP1-212ENST00000576613 A0A0B4J2A0 478 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 PLAC8L1A1L4L8 177 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 ZNF98A6NK75 572 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 BOLA2-SMG1P6H3BVE0 249 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 AKR1C4P17516 323 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 BTF3P20290 206 aaKnown RBP8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 FCN2Q15485 313 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 OR1S1Q8NH92 325 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 LINC01587Q99440 93 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 Q9H3A6 140 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 SHPKQ9UHJ6 478 aa8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 TIMM8BQ9Y5J9 83 aaPredicted RBP8.12□□□□□ -1.11
CTDNEP1-212ENST00000576613 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms