RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NOXA1Q86UR1 476 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 OR8I2Q8N0Y5 310 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 OR4C16Q8NGL9 310 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 OR52I2Q8NH67 350 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 TEX13DA0A0J9YY54 714 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-206ENST00000572083 A8MTW9 85 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 EPM2AB3EWF7 344 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 INSP01308 110 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 ATP5G1P05496 136 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 ATP5G3P48201 142 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 BAP18Q8IXM2 172 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 YIPF6Q96EC8 236 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 NAA60Q9H7X0 242 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 MYCBP2O75592 4640 aa13.84□□□□□ -0.19
CCDC40-206ENST00000572083 PLAC8L1A1L4L8 177 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 CRXO43186 299 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-206ENST00000572083 TNFAIP8O95379 198 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 AZU1P20160 251 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 TBPP20226 339 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 OR2F1Q13607 317 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 GAMTQ14353 236 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 OR11H7Q8NGC8 314 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 Q9H8V8 135 aa13.83□□□□□ -0.2
CCDC40-206ENST00000572083 FAM25AB3EWG3 89 aa13.82□□□□□ -0.2
CCDC40-206ENST00000572083 FAM25CB3EWG5 89 aa13.82□□□□□ -0.2
CCDC40-206ENST00000572083 FAM25GB3EWG6 89 aa13.82□□□□□ -0.2
CCDC40-206ENST00000572083 CNN1P51911 297 aaKnown RBP13.82□□□□□ -0.2
CCDC40-206ENST00000572083 SAMD13Q5VXD3 122 aa13.82□□□□□ -0.2
CCDC40-206ENST00000572083 FAAP20Q6NZ36 180 aa13.82□□□□□ -0.2
CCDC40-206ENST00000572083 RTBDNQ9BSG5 229 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-206ENST00000572083 MTFP1Q9UDX5 166 aa13.82□□□□□ -0.2
CCDC40-206ENST00000572083 C14orf166Q9Y224 244 aaKnown RBP13.82□□□□□ -0.2
CCDC40-206ENST00000572083 VPS13BQ7Z7G8 4022 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 SULT1A3P0DMM9 295 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 SULT1A4P0DMN0 295 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 TSPOP30536 169 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 MEOX2P50222 304 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 NCS1P62166 190 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 DLK1P80370 383 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 TTC32Q5I0X7 151 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 LGI3Q8N145 548 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 DTD1Q8TEA8 209 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 SLC35E1Q96K37 410 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 C17orf77Q96MU5 243 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 SLC25A32Q9H2D1 315 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 SLC25A22Q9H936 323 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 U3KQ87 197 aa13.81□□□□□ -0.2
CCDC40-206ENST00000572083 TRAV12-2A0A075B6T6 113 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 SNRPGP15A8MWD9 76 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 RAB3DO95716 219 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 IGFL4Q6B9Z1 124 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 UHRF2Q96PU4 802 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 Q9H3A6 140 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 PRR13Q9NZ81 148 aa13.8□□□□□ -0.2
CCDC40-206ENST00000572083 CBY3A6NI87 242 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 GABARAPH6UMI1 98 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 GABARAPO95166 117 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 INAFM2P0DMQ5 153 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 GALR1P47211 349 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 TAS2R19P59542 299 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 GPR107Q5VW38 600 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 RSG1Q9BU20 258 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 RBKSQ9H477 322 aa13.79□□□□□ -0.2
CCDC40-206ENST00000572083 CRYM-AS1A6NIL9 109 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 FABP1P07148 127 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 BTF3P20290 206 aaKnown RBP13.78□□□□□ -0.2
CCDC40-206ENST00000572083 VBP1P61758 197 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 B2MP61769 119 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 STEAP1BQ6NZ63 245 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 RNF182Q8N6D2 247 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 TMEM229BQ8NBD8 167 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 SLC25A39Q9BZJ4 359 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-206ENST00000572083 HSPB7Q9UBY9 170 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 TMEM56-RWDD3S4R434 201 aa13.78□□□□□ -0.2
CCDC40-206ENST00000572083 DUSP14O95147 198 aaKnown RBP13.77□□□□□ -0.21
CCDC40-206ENST00000572083 HTN1P15515 57 aa13.77□□□□□ -0.21
CCDC40-206ENST00000572083 GPX4P36969 197 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-206ENST00000572083 EXTL2Q9UBQ6 330 aa13.77□□□□□ -0.21
CCDC40-206ENST00000572083 CACFD1Q9UGQ2 172 aa13.77□□□□□ -0.21
CCDC40-206ENST00000572083 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
CCDC40-206ENST00000572083 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
CCDC40-206ENST00000572083 GPR141Q7Z602 305 aa13.76□□□□□ -0.21
CCDC40-206ENST00000572083 LINC01587Q99440 93 aa13.76□□□□□ -0.21
CCDC40-206ENST00000572083 TRGV9Q99603 122 aa13.76□□□□□ -0.21
CCDC40-206ENST00000572083 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
CCDC40-206ENST00000572083 ZNF98A6NK75 572 aa13.75□□□□□ -0.21
CCDC40-206ENST00000572083 BOLA2-SMG1P6H3BVE0 249 aa13.75□□□□□ -0.21
CCDC40-206ENST00000572083 ZNF182P17025 639 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-206ENST00000572083 FUSP35637 526 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC40-206ENST00000572083 OR5I1Q13606 314 aa13.75□□□□□ -0.21
CCDC40-206ENST00000572083 GNPNAT1Q96EK6 184 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-206ENST00000572083 C16orf74Q96GX8 76 aa13.75□□□□□ -0.21
CCDC40-206ENST00000572083 TRAV26-1A0A087WT03 109 aa13.74□□□□□ -0.21
CCDC40-206ENST00000572083 A0A0J9YY99 117 aa13.74□□□□□ -0.21
CCDC40-206ENST00000572083 SMCO1Q147U7 214 aa13.74□□□□□ -0.21
CCDC40-206ENST00000572083 SURF2Q15527 256 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-206ENST00000572083 NOP10Q9NPE3 64 aaKnown RBP13.74□□□□□ -0.21
CCDC40-206ENST00000572083 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
CCDC40-206ENST00000572083 TIMM8BQ9Y5J9 83 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms