RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ADARB2-AS1A8MUL3 147 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 ZNF705EA8MWA4 302 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 CDC34P49427 236 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 SLURP1P55000 103 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 RHOBP62745 196 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 PATE2Q6UY27 113 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 GPHB5Q86YW7 130 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 TMEM37Q8WXS4 190 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 UHRF2Q96PU4 802 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 RNF2Q99496 336 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 MDFIQ99750 246 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 ACTR3CQ9C0K3 210 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 RABAC1Q9UI14 185 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 CCL24O00175 119 aa11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 RGS13O14921 159 aa11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 ZNF207O43670 478 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 S100A7AQ86SG5 101 aa11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 METTL26Q96S19 204 aa11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 CITED1Q99966 193 aa11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 MRPL27Q9P0M9 148 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 FUT9Q9Y231 359 aa11.81□□□□□ -0.52
HERPUD1-219ENST00000570273 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 SEC14L6B5MCN3 397 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 SYNJ2BPP57105 145 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 MIR17HGQ75NE6 70 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 LINC00305Q7Z4B0 112 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 REC114Q7Z4M0 266 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 LRRC20Q8TCA0 184 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 PCNPQ8WW12 178 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 SEPSECSQ9HD40 501 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 UFC1Q9Y3C8 167 aa11.8□□□□□ -0.52
HERPUD1-219ENST00000570273 H3BRN7 92 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 S100A7P31151 101 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 RAB14P61106 215 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 BLOC1S1P78537 153 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 FHL3Q13643 280 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 ZNF726P1Q15940 193 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 C12orf54Q6X4T0 127 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 RAB24Q969Q5 203 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 SHANK2-AS3Q9BTD1 123 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 SCRT1Q9BWW7 348 aa11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 SLC25A39Q9BZJ4 359 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-219ENST00000570273 MAP1LC3B2A6NCE7 125 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 HMGB3O15347 200 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 NPPCP23582 126 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 KLF5Q13887 457 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 MORN5Q5VZ52 161 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 LCN15Q6UWW0 184 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 NARS2Q96I59 477 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 DAZ1Q9NQZ3 744 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 TECRQ9NZ01 308 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 PFDN2Q9UHV9 154 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 TENM1Q9UKZ4 2725 aa11.78□□□□□ -0.52
HERPUD1-219ENST00000570273 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 A0A1B0GV50 99 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 LGALS9O00182 355 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 C8orf88P0DMB2 117 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 MYCNOSP40205 109 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 TAS2R45P59539 299 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 TM4SF20Q53R12 229 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 LEMD1Q68G75 181 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 ZNF747Q9BV97 191 aa11.77□□□□□ -0.52
HERPUD1-219ENST00000570273 DNHD1Q96M86 4753 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 ZNF98A6NK75 572 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 A8MWP6 167 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 K7EMT4 169 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 PF4P02776 101 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 NMBP08949 121 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 CRYBB3P26998 211 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 KHDC3LQ587J8 217 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 C3orf56Q8N813 242 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 DLX4Q92988 240 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
HERPUD1-219ENST00000570273 IGHV3-66A0A0C4DH42 116 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 OR7C2O60412 319 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 IQCF2Q8IXL9 164 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 MBD3L1Q8WWY6 194 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
HERPUD1-219ENST00000570273 TEX46H3BTG2 121 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 HBE1P02100 147 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms