RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PLGLAQ15195 96 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 TMEM183BQ1AE95 376 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 TIGITQ495A1 244 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 COX19Q49B96 90 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 DNLZQ5SXM8 178 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 ASPHD1Q5U4P2 390 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 C16orf54Q6UWD8 224 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 FAM231DQ6ZW35 169 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 S100A7AQ86SG5 101 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 ARL6IP6Q8N6S5 226 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF491Q8N8L2 437 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 OR1B1Q8NGR6 318 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 SGMS2Q8NHU3 365 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 VN1R17PQ8TDU5 208 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 C10orf105Q8TEF2 133 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 ARPC1AQ92747 370 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 IGF2BP2-AS1Q96M15 143 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 C12orf57Q99622 126 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 BPESC1Q9GZL8 116 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 AURKAIP1Q9NWT8 199 aaPredicted RBP4.24□□□□□ -1.73
SF3B3-213ENST00000569687 THYN1Q9P016 225 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 EPDR1Q9UM22 224 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 HIGD1AQ9Y241 93 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 V9GYV3 84 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 EPG5Q9HCE0 2579 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 HIVEP3Q5T1R4 2406 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 NBPF19A0A087WUL8 3843 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 NBASA2RRP1 2371 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 COL12A1Q99715 3063 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 TRBV9A0A0B4J1U6 114 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 IGHV7-81A0A0B4J1V7 117 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 A0A0U1RQK1 487 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 CENPVL3A0A0U1RRI6 287 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 A0A1W2PPQ1 181 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 SMIM27A0A1W2PRY6 76 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF320A2RRD8 509 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 PGPEP1LA6NFU8 196 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 PEX7O00628 323 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 NPFFO15130 113 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 BRI3O95415 125 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 AMY1AP04745 511 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 PYYP10082 97 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 GP9P14770 177 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 TMEM11P17152 192 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 CNN1P51911 297 aaKnown RBP4.23□□□□□ -1.73
SF3B3-213ENST00000569687 DSCR9P59020 149 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 ERVFC1-1P60608 527 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 S100A12P80511 92 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 RPL19P84098 196 aaKnown RBP4.23□□□□□ -1.73
SF3B3-213ENST00000569687 HES1Q14469 280 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 CENPWQ5EE01 88 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 C19orf35Q6ZS72 473 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 BAGE2Q86Y30 109 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 HIST3H2BBQ8N257 126 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 LYPD1Q8N2G4 141 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 Q8N9W7 124 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 NECAP1Q8NC96 275 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 OR5T1Q8NG75 326 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 MBD6Q96DN6 1003 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 RBM14Q96PK6 669 aaKnown RBP4.23□□□□□ -1.73
SF3B3-213ENST00000569687 ATP6V0BQ99437 205 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 RASL11BQ9BPW5 248 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 SHANK2-AS3Q9BTD1 123 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 CHRDL1Q9BU40 450 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 MLST8Q9BVC4 326 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 SLC25A39Q9BZJ4 359 aaPredicted RBP4.23□□□□□ -1.73
SF3B3-213ENST00000569687 MEGF9Q9H1U4 602 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 OTORQ9NRC9 128 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 GAR1Q9NY12 217 aaKnown RBP4.23□□□□□ -1.73
SF3B3-213ENST00000569687 TACC2O95359 2948 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 ZFYVE26Q68DK2 2539 aa4.23□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF462Q96JM2 2506 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 PGPA6NDG6 321 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 NCBP2LA6PVI3 153 aaKnown RBP4.22□□□□□ -1.73
SF3B3-213ENST00000569687 MRPS12O15235 138 aaKnown RBP4.22□□□□□ -1.73
SF3B3-213ENST00000569687 IGLV1-40P01703 118 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 APELAP0DMC3 54 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 PLA2G2AP14555 144 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 FOSL1P15407 271 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 CD24P25063 80 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 S100A7P31151 101 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 CRIP2P52943 208 aaPredicted RBP4.22□□□□□ -1.73
SF3B3-213ENST00000569687 RANP62826 216 aaKnown RBP4.22□□□□□ -1.73
SF3B3-213ENST00000569687 OR5I1Q13606 314 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 RPEL1Q2QD12 228 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 FBLN7Q53RD9 439 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 FAM120AOSQ5T036 256 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF600Q6ZNG1 722 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 TMEM183AQ8IXX5 376 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 C5orf17Q8NAS9 161 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 FAM110DQ8TAY7 271 aaPredicted RBP4.22□□□□□ -1.73
SF3B3-213ENST00000569687 PIFOQ8TCI5 191 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 FAM168AQ92567 244 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 GPR82Q96P67 336 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 PIMREGQ9BSJ6 248 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 GNB1LQ9BYB4 327 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 C21orf62Q9NYP8 219 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF492Q9P255 531 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms