RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SLC45A2Q9UMX9 530 aa12.2□□□□□ -0.46
USB1-215ENST00000569252 IGHV7-4-1A0A0J9YVY3 117 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 OR5G3P0C626 314 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 B2MP61769 119 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 OR1L4Q8NGR5 311 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 MRAPQ8TCY5 172 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 PARD6GQ9BYG4 376 aaPredicted RBP12.19□□□□□ -0.46
USB1-215ENST00000569252 SMPXQ9UHP9 88 aa12.19□□□□□ -0.46
USB1-215ENST00000569252 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
USB1-215ENST00000569252 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 COX7A2P2O60397 106 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 CD5P06127 495 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 EIF5AP63241 154 aaKnown RBP12.18□□□□□ -0.46
USB1-215ENST00000569252 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
USB1-215ENST00000569252 TMUB2Q71RG4 321 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 STPG3Q8N7X2 389 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 PFDN5Q99471 154 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 GGTLC1Q9BX51 225 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 WFDC1Q9HC57 220 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 DNAJC4Q9NNZ3 241 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 HIGD1AQ9Y241 93 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 PXMP4Q9Y6I8 212 aa12.18□□□□□ -0.46
USB1-215ENST00000569252 IGHV3-49A0A0A0MS15 119 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 CRYBB3P26998 211 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 RPL11P62913 178 aaKnown RBP12.17□□□□□ -0.46
USB1-215ENST00000569252 OPCMLQ14982 345 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 USF2Q15853 346 aaPredicted RBP12.17□□□□□ -0.46
USB1-215ENST00000569252 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
USB1-215ENST00000569252 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 TMEM182Q6ZP80 229 aaPredicted RBP12.17□□□□□ -0.46
USB1-215ENST00000569252 GNPNAT1Q96EK6 184 aaPredicted RBP12.17□□□□□ -0.46
USB1-215ENST00000569252 SLC39A9Q9NUM3 307 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 DOK5Q9P104 306 aa12.17□□□□□ -0.46
USB1-215ENST00000569252 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 CXCL2P19875 107 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 PLP1P60201 277 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 PAFAH1B2P68402 229 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 C10orf113Q5VZT2 155 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 IL34Q6ZMJ4 242 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
USB1-215ENST00000569252 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
USB1-215ENST00000569252 AURKAIP1Q9NWT8 199 aaPredicted RBP12.16□□□□□ -0.46
USB1-215ENST00000569252 IGHV3OR16-13A0A075B7E8 117 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 IGHV3-74A0A0B4J1X5 117 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 IGHV3-66A0A0C4DH42 116 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 CHEK1O14757 476 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 BCL2L11O43521 198 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 PRR20EP86478 221 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 PRR20CP86479 221 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 PRR20DP86480 221 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 PRR20BP86481 221 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 PRR20AP86496 221 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 CD300CQ08708 224 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 RPL7L1Q6DKI1 246 aaKnown RBP12.15□□□□□ -0.46
USB1-215ENST00000569252 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 ARV1Q9H2C2 271 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.46
USB1-215ENST00000569252 HELTA6NFD8 242 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 MBP02144 154 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 ACOT6Q3I5F7 207 aaPredicted RBP12.14□□□□□ -0.47
USB1-215ENST00000569252 LGALSLQ3ZCW2 172 aaPredicted RBP12.14□□□□□ -0.47
USB1-215ENST00000569252 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 C1orf194Q5T5A4 169 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 GATAD1Q8WUU5 269 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 ST8SIA2Q92186 375 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 RNF2Q99496 336 aa12.14□□□□□ -0.47
USB1-215ENST00000569252 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 IGLV1-51P01701 117 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 APOHP02749 345 aaPredicted RBP12.13□□□□□ -0.47
USB1-215ENST00000569252 ATP6V0CP27449 155 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 SERF2P84101 59 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 LINC00305Q7Z4B0 112 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
USB1-215ENST00000569252 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
USB1-215ENST00000569252 VSIRQ9H7M9 311 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 MLXQ9UH92 298 aa12.13□□□□□ -0.47
USB1-215ENST00000569252 ZNF98A6NK75 572 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 DNASE2O00115 360 aaPredicted RBP12.12□□□□□ -0.47
USB1-215ENST00000569252 BUB3O43684 328 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
USB1-215ENST00000569252 EDN2P20800 178 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 GUCA2BQ16661 112 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 CD300EQ496F6 205 aaPredicted RBP12.12□□□□□ -0.47
USB1-215ENST00000569252 EIF5AL1Q6IS14 154 aaKnown RBP12.12□□□□□ -0.47
USB1-215ENST00000569252 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 GPR82Q96P67 336 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 U3KQE9 123 aa12.12□□□□□ -0.47
USB1-215ENST00000569252 A0A1W2PPV4 95 aa12.11□□□□□ -0.47
USB1-215ENST00000569252 GALR1P47211 349 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms