RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 LGALS9O00182 355 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 LINC00869P0C866 280 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 SLURP1P55000 103 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 EIF5AP63241 154 aaKnown RBP7.98□□□□□ -1.13
CDH3-210ENST00000569117 KLF5Q13887 457 aaPredicted RBP7.98□□□□□ -1.13
CDH3-210ENST00000569117 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 PXDC1Q5TGL8 231 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 TOMM20LQ6UXN7 152 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 UNQ9165/PRO28630Q6UXU0 137 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 TMEM182Q6ZP80 229 aaPredicted RBP7.98□□□□□ -1.13
CDH3-210ENST00000569117 SLC51BQ86UW2 128 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 ZNF709Q8N972 641 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 HSD17B11Q8NBQ5 300 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 OR2G3Q8NGZ4 309 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 Q8WTZ3 238 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 GNPNAT1Q96EK6 184 aaPredicted RBP7.98□□□□□ -1.13
CDH3-210ENST00000569117 RNF125Q96EQ8 232 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 GINS3Q9BRX5 216 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 PXMP4Q9Y6I8 212 aa7.98□□□□□ -1.13
CDH3-210ENST00000569117 M0QZ24 198 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 IL4P05112 153 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 TPT1P13693 172 aaKnown RBP7.97□□□□□ -1.13
CDH3-210ENST00000569117 GATA2P23769 480 aaPredicted RBP7.97□□□□□ -1.13
CDH3-210ENST00000569117 SYNJ2BPP57105 145 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 PLP1P60201 277 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 B2MP61769 119 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 USF2Q15853 346 aaPredicted RBP7.97□□□□□ -1.13
CDH3-210ENST00000569117 MIC13Q5XKP0 118 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 LINC00482Q8N8I6 264 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 SH3BGRL3Q9H299 93 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
CDH3-210ENST00000569117 SLC39A9Q9NUM3 307 aa7.97□□□□□ -1.13
CDH3-210ENST00000569117 YIF1AO95070 293 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 TSPAN15O95858 294 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 SPP1P10451 314 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 ELLP55199 621 aaPredicted RBP7.96□□□□□ -1.14
CDH3-210ENST00000569117 LYZP61626 148 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 CFAP161Q6P656 301 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 BAP18Q8IXM2 172 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 DLX4Q92988 240 aaPredicted RBP7.96□□□□□ -1.14
CDH3-210ENST00000569117 UFC1Q9Y3C8 167 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 WNK1Q9H4A3 2382 aa7.96□□□□□ -1.14
CDH3-210ENST00000569117 IGHV3OR16-8A0A075B7F1 116 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 ZNF320A2RRD8 509 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 TMEM213A2RRL7 107 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 K7EMT4 169 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 OVOL1O14753 267 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 SEC11BP0C7V7 166 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 SERF2P84101 59 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 FFAR4Q5NUL3 377 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 Q6ZRG5 221 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 METTL26Q96S19 204 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 PFDN5Q99471 154 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 PBDC1Q9BVG4 233 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 SLC25A32Q9H2D1 315 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 RABAC1Q9UI14 185 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 RFNGQ9Y644 331 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 VWFP04275 2813 aa7.95□□□□□ -1.14
CDH3-210ENST00000569117 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 COX7A2P2O60397 106 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 HYPMO75409 117 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 ORM2P19652 201 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 CRYBB3P26998 211 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 EIF5AL1Q6IS14 154 aaKnown RBP7.94□□□□□ -1.14
CDH3-210ENST00000569117 OR1L4Q8NGR5 311 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 OR1B1Q8NGR6 318 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 MARC2Q969Z3 335 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 PHYHIPLQ96FC7 376 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 MRPL27Q9P0M9 148 aaKnown RBP7.94□□□□□ -1.14
CDH3-210ENST00000569117 DOK5Q9P104 306 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 HIGD1AQ9Y241 93 aa7.94□□□□□ -1.14
CDH3-210ENST00000569117 IGHV7-4-1A0A0J9YVY3 117 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 C2orf70A6NJV1 201 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 H3BRN7 92 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 ZNF207O43670 478 aaKnown RBP7.93□□□□□ -1.14
CDH3-210ENST00000569117 MBP02144 154 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 OR5G3P0C626 314 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 M6PRP20645 277 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 S100A7P31151 101 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 ACOT6Q3I5F7 207 aaPredicted RBP7.93□□□□□ -1.14
CDH3-210ENST00000569117 GCSAMLQ5JQS6 135 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 C10orf113Q5VZT2 155 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 PATE2Q6UY27 113 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 IL34Q6ZMJ4 242 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 S100A7AQ86SG5 101 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 SPATA3Q8NHX4 192 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 GATAD1Q8WUU5 269 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 TMED6Q8WW62 240 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 TMEM37Q8WXS4 190 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 SHANK2-AS3Q9BTD1 123 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 SIGLEC8Q9NYZ4 499 aa7.93□□□□□ -1.14
CDH3-210ENST00000569117 UMAD1C9J7I0 102 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 C8orf88P0DMB2 117 aa7.92□□□□□ -1.14
CDH3-210ENST00000569117 EDN2P20800 178 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms