RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SMIM4Q8WVI0 70 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 NIPSNAP3BQ9BS92 247 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 HSPB7Q9UBY9 170 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 LOC102723971A0A1B0GUV8 181 aa11.02□□□□□ -0.65
NME3-211ENST00000568561 AKAIN1P0CW23 69 aa11.02□□□□□ -0.65
NME3-211ENST00000568561 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
NME3-211ENST00000568561 ID1P41134 155 aa11.02□□□□□ -0.65
NME3-211ENST00000568561 SSBP1Q04837 148 aaKnown RBP11.02□□□□□ -0.65
NME3-211ENST00000568561 GAMTQ14353 236 aa11.02□□□□□ -0.65
NME3-211ENST00000568561 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
NME3-211ENST00000568561 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
NME3-211ENST00000568561 C7orf50Q9BRJ6 194 aaKnown RBP11.02□□□□□ -0.65
NME3-211ENST00000568561 YTHDF2Q9Y5A9 579 aaKnown RBP11.02□□□□□ -0.65
NME3-211ENST00000568561 SUPT4H1P63272 117 aaKnown RBP11.01□□□□□ -0.65
NME3-211ENST00000568561 MRPS10P82664 201 aaKnown RBP11.01□□□□□ -0.65
NME3-211ENST00000568561 SMCO1Q147U7 214 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 ZNF79Q15937 498 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 TMEM88Q6PEY1 159 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 IL22RA2Q969J5 263 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 PRRT1Q99946 306 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 U3KQ87 197 aa11.01□□□□□ -0.65
NME3-211ENST00000568561 HBE1P02100 147 aa11□□□□□ -0.65
NME3-211ENST00000568561 AKR1C4P17516 323 aa11□□□□□ -0.65
NME3-211ENST00000568561 CCR6P51684 374 aa11□□□□□ -0.65
NME3-211ENST00000568561 PSG9Q00887 426 aa11□□□□□ -0.65
NME3-211ENST00000568561 IL18Q14116 193 aa11□□□□□ -0.65
NME3-211ENST00000568561 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
NME3-211ENST00000568561 OR1S1Q8NH92 325 aa11□□□□□ -0.65
NME3-211ENST00000568561 FAM210BQ96KR6 192 aa11□□□□□ -0.65
NME3-211ENST00000568561 PFDN2Q9UHV9 154 aa11□□□□□ -0.65
NME3-211ENST00000568561 A0A0B4J2A0 478 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 A0A0J9YX75 114 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 TEX48A0A1B0GUV7 120 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 PRM2P04554 102 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 IAPPP10997 89 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 PAX9P55771 341 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 EBLN2Q6P2I7 272 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 SHPKQ9UHJ6 478 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 PAIP2BQ9ULR5 123 aaKnown RBP10.99□□□□□ -0.65
NME3-211ENST00000568561 KCNIP3Q9Y2W7 256 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 LRP1BQ9NZR2 4599 aa10.99□□□□□ -0.65
NME3-211ENST00000568561 IGKV1OR2-108A0A075B7D4 117 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 ISLRO14498 428 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 TNFSF8P32971 234 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 S100A5P33763 92 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 GPX4P36969 197 aaPredicted RBP10.98□□□□□ -0.65
NME3-211ENST00000568561 DAD1P61803 113 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 RRN3P1Q2M238 152 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 RNF212Q495C1 297 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 C1orf194Q5T5A4 169 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 CCDC190Q86UF4 302 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 DIRAS2Q96HU8 199 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 C16orf92Q96LL3 132 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 MAGT1Q9H0U3 335 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 SLC25A32Q9H2D1 315 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 SLC25A22Q9H936 323 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 MCUBQ9NWR8 336 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 CACFD1Q9UGQ2 172 aa10.98□□□□□ -0.65
NME3-211ENST00000568561 ANKRD20A5PA0PJZ0 165 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 SNRPGP15A8MWD9 76 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 OXA1LQ15070 435 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 SOHLH1Q5JUK2 328 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 C1orf134Q5TEV5 83 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 AMTNQ6UX39 209 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 C17orf77Q96MU5 243 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 SOSTQ9BQB4 213 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 TMEM208Q9BTX3 173 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 RPRMQ9NS64 109 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 DOK5Q9P104 306 aa10.97□□□□□ -0.65
NME3-211ENST00000568561 CTDSPLO15194 276 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 FABP1P07148 127 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 SPATA31B1PQ5VZV4 182 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 TRGV9Q99603 122 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 SCP2D1Q9UJQ7 156 aa10.96□□□□□ -0.65
NME3-211ENST00000568561 ZNF705GA8MUZ8 300 aaPredicted RBP10.95□□□□□ -0.66
NME3-211ENST00000568561 M0R2Z0 102 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
NME3-211ENST00000568561 SPINK13Q1W4C9 94 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 S100ZQ8WXG8 99 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 IGF2BP2-AS1Q96M15 143 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 RABL2AQ9UBK7 228 aaPredicted RBP10.95□□□□□ -0.66
NME3-211ENST00000568561 RABL2BQ9UNT1 228 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 TMED3Q9Y3Q3 217 aa10.95□□□□□ -0.66
NME3-211ENST00000568561 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
NME3-211ENST00000568561 ANXA3P12429 323 aa10.94□□□□□ -0.66
NME3-211ENST00000568561 GALR1P47211 349 aa10.94□□□□□ -0.66
NME3-211ENST00000568561 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
NME3-211ENST00000568561 TMEM182Q6ZP80 229 aaPredicted RBP10.94□□□□□ -0.66
NME3-211ENST00000568561 TMED4Q7Z7H5 227 aa10.94□□□□□ -0.66
NME3-211ENST00000568561 BAP18Q8IXM2 172 aa10.94□□□□□ -0.66
NME3-211ENST00000568561 RNF182Q8N6D2 247 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms