RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 NRARPQ7Z6K4 114 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 LINC00528Q8N1L1 170 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 PPP1R14BQ96C90 147 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 SMIM8Q96KF7 97 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 TRGV9Q99603 122 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 WDR12Q9GZL7 423 aaKnown RBP6.98□□□□□ -1.29
SF3B3-211ENST00000568291 TMEM231Q9H6L2 316 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 FAM24AA6NFZ4 105 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 DEFB4AO15263 64 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-211ENST00000568291 BCAP31P51572 246 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 APOC4P55056 127 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 S100A10P60903 97 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 ACTL10Q5JWF8 245 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 IGFL4Q6B9Z1 124 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 SIGLEC15Q6ZMC9 328 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 LINC00299Q6ZSB3 139 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 OR1B1Q8NGR6 318 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 ENKURQ8TC29 256 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 CSTL1Q9H114 145 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 SLC25A22Q9H936 323 aa6.97□□□□□ -1.29
SF3B3-211ENST00000568291 HELTA6NFD8 242 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 K7EPK0 472 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 CST7O76096 145 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 CA1P00915 261 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-211ENST00000568291 IGKV3-20P01619 116 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 CD5P06127 495 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 SNRPCP09234 159 aaKnown RBP6.96□□□□□ -1.3
SF3B3-211ENST00000568291 CAV2P51636 162 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 TMEM14EPQ6UXP3 125 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 TMEM217Q8N7C4 229 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 RNF183Q96D59 192 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 C2orf50Q96LR7 162 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 LINC00052Q96N35 136 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 RAB40CQ96S21 281 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 CLEC5AQ9NY25 188 aa6.96□□□□□ -1.3
SF3B3-211ENST00000568291 A6NJY4 79 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 L7N2F9 121 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 GOSR2O14653 212 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 IL5P05113 134 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 GIG44P09565 113 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-211ENST00000568291 CMC4P56277 68 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-211ENST00000568291 FXYD7P58549 80 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 VAMP2P63027 116 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 SLC38A11Q08AI6 406 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 RAB32Q13637 225 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 PMS2P11Q13670 270 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 GDF5OSQ5U4N7 250 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 CYP2G1PQ6ZSU1 146 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 Q6ZWC4 215 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 TMEM144Q7Z5S9 345 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 STHQ8IWL8 128 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 OR8I2Q8N0Y5 310 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 OR10P1Q8NGE3 313 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 C17orf77Q96MU5 243 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 UHRF2Q96PU4 802 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 RSG1Q9BU20 258 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 SCRT1Q9BWW7 348 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 NRN1Q9NPD7 142 aa6.95□□□□□ -1.3
SF3B3-211ENST00000568291 TRAV2A0A0B4J234 112 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 KIR2DL5BA0A0G2JN68 375 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 KIR2DL5BA0A0G2JPC4 375 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 IGSF23A1L1A6 192 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 CXorf65A6NEN9 183 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 ZNF98A6NK75 572 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 F6UB75 175 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 INMT-MINDY4F8WBC2 141 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 UBE2CO00762 179 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 TSC22D2O75157 780 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 LY6G6CO95867 125 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 FABP1P07148 127 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 OR5G3P0C626 314 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 C4BPBP20851 252 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 AP2S1P53680 142 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-211ENST00000568291 DLK1P80370 383 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 FGL1Q08830 312 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 IL15RAQ13261 267 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 LRRC37A5PQ49AS3 106 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 PATE2Q6UY27 113 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 TRPT1Q86TN4 253 aaKnown RBP6.94□□□□□ -1.3
SF3B3-211ENST00000568291 KIR2DL5AQ8N109 375 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 BPIFCQ8NFQ6 507 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 OR11H2Q8NH07 326 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 KIR2DL5BQ8NHK3 375 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 RARRES2Q99969 163 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 SLC25A32Q9H2D1 315 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 C11orf1Q9H5F2 150 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
SF3B3-211ENST00000568291 NUPR2A6NF83 97 aa6.93□□□□□ -1.3
SF3B3-211ENST00000568291 LINC00869P0C866 280 aa6.93□□□□□ -1.3
SF3B3-211ENST00000568291 ZNF705DP0CH99 300 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-211ENST00000568291 ZNF705BP0CI00 300 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-211ENST00000568291 TAS2R30P59541 319 aa6.93□□□□□ -1.3
SF3B3-211ENST00000568291 TMEM147Q9BVK8 224 aa6.93□□□□□ -1.3
SF3B3-211ENST00000568291 ARL6Q9H0F7 186 aa6.93□□□□□ -1.3
SF3B3-211ENST00000568291 NPVFQ9HCQ7 196 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms