RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CHAC2Q8WUX2 184 aa5.99□□□□□ -1.45
HDGFL3-205ENST00000568129 NRN1Q9NPD7 142 aa5.99□□□□□ -1.45
HDGFL3-205ENST00000568129 ZNF98A6NK75 572 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 A8MTW9 85 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 H3BP45 60 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 PRAF2O60831 178 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 CCNKO75909 580 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 METTL15P1P0C7V9 234 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 SPP1P10451 314 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 RPL35AP18077 110 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 VWC2Q2TAL6 325 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 DEFB135Q30KP9 77 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 PXDC1Q5TGL8 231 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 LEMD1Q68G75 181 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 MORN3Q6PF18 240 aaPredicted RBP5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 CYP2G1PQ6ZSU1 146 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 CSNK1G2-AS1Q8NCQ2 148 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 BPIFCQ8NFQ6 507 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 OR10P1Q8NGE3 313 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 GSKIPQ9P0R6 139 aa5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-205ENST00000568129 RYR3Q15413 4870 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 ZNF705EA8MWA4 302 aaPredicted RBP5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 H3BMM0 161 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 ISLRO14498 428 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 CCSO14618 274 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 ZNF688P0C7X2 276 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 GATA2P23769 480 aaPredicted RBP5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 S100A7P31151 101 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 PSMB3P49720 205 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 LYZP61626 148 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 SNRPD3P62318 126 aaKnown RBP5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 OR2F1Q13607 317 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 TEPPQ6URK8 271 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 NRARPQ7Z6K4 114 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 STHQ8IWL8 128 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 GPR82Q96P67 336 aa5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 PAIP2BQ9ULR5 123 aaKnown RBP5.97□□□□□ -1.45
HDGFL3-205ENST00000568129 HYDINQ4G0P3 5121 aa5.96□□□□□ -1.45
HDGFL3-205ENST00000568129 A0A0J9YWU9 116 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 C5orf51A6NDU8 294 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 INMT-MINDY4F8WBC2 141 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 H3BRN7 92 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 MRPS12O15235 138 aaKnown RBP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 HLA-DRB4P13762 266 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 MEOX2P50222 304 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 EWSR1Q01844 656 aaKnown RBP eCLIP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 AKR1C1Q04828 323 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 SPATA31B1PQ5VZV4 182 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 GSG1LQ6UXU4 331 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 PATE2Q6UY27 113 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 OR8I2Q8N0Y5 310 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 OR1B1Q8NGR6 318 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 ENKURQ8TC29 256 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 RARRES2Q99969 163 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 SHANK2-AS3Q9BTD1 123 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 PBDC1Q9BVG4 233 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 SLC25A39Q9BZJ4 359 aaPredicted RBP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 NMES1Q9C002 83 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 SLC25A32Q9H2D1 315 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 C11orf68Q9H3H3 251 aaKnown RBP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 SAV1Q9H4B6 383 aaPredicted RBP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 GPN1Q9HCN4 374 aaPredicted RBP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 LYRM2Q9NU23 88 aaPredicted RBP5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 HLA-DRB4X5D2U9 266 aa5.96□□□□□ -1.46
HDGFL3-205ENST00000568129 DNAH6Q9C0G6 4158 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 A0A087X0K7 114 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 KNCNA6PVL3 124 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 HYPMO75409 117 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 SCGB1D2O95969 90 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 LINC00869P0C866 280 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 C4BPBP20851 252 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 S100A11P31949 105 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 PRR20EP86478 221 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 PRR20CP86479 221 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 PRR20DP86480 221 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 PRR20BP86481 221 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 PRR20AP86496 221 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 RAB32Q13637 225 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 ATP6V1FQ16864 119 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 PSMG4Q5JS54 123 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 TMEM252Q8N6L7 170 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 MGST2Q99735 147 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 TMEM147Q9BVK8 224 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 MGAT4CQ9UBM8 478 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 WDR83OSQ9Y284 106 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 RYR2Q92736 4967 aa5.95□□□□□ -1.46
HDGFL3-205ENST00000568129 KMT2AQ03164 3969 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 LCE6AA0A183 80 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 FAM24AA6NFZ4 105 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 FAM25EA8MYX2 175 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 H0YIZ8 118 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 L7N2F9 121 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 AGPAT2O15120 278 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 CA1P00915 261 aaPredicted RBP5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 ORM2P19652 201 aa5.94□□□□□ -1.46
HDGFL3-205ENST00000568129 PVALBP20472 110 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms