RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 OR10P1Q8NGE3 313 aa18.52■□□□□ 0.56
FANCA-228ENST00000567943 PPP1R14BQ96C90 147 aa18.52■□□□□ 0.56
FANCA-228ENST00000567943 GPN1Q9HCN4 374 aaPredicted RBP18.52■□□□□ 0.56
FANCA-228ENST00000567943 AGRNO00468 2067 aa18.51■□□□□ 0.55
FANCA-228ENST00000567943 K7EPK0 472 aa18.51■□□□□ 0.55
FANCA-228ENST00000567943 CFDP00746 253 aaPredicted RBP18.51■□□□□ 0.55
FANCA-228ENST00000567943 TMEM182Q6ZP80 229 aaPredicted RBP18.51■□□□□ 0.55
FANCA-228ENST00000567943 BPIFCQ8NFQ6 507 aa18.51■□□□□ 0.55
FANCA-228ENST00000567943 TP53TG1Q9Y2A0 90 aa18.51■□□□□ 0.55
FANCA-228ENST00000567943 SPRY2O43597 315 aa18.5■□□□□ 0.55
FANCA-228ENST00000567943 DEFA1P59665 94 aa18.5■□□□□ 0.55
FANCA-228ENST00000567943 DEFA3P59666 94 aa18.5■□□□□ 0.55
FANCA-228ENST00000567943 ALMS1Q8TCU4 4167 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 INMT-MINDY4F8WBC2 141 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 ARL16Q0P5N6 197 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 RNF183Q96D59 192 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 CSTL1Q9H114 145 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 NRN1Q9NPD7 142 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 MGAT4CQ9UBM8 478 aa18.49■□□□□ 0.55
FANCA-228ENST00000567943 ORM2P19652 201 aa18.48■□□□□ 0.55
FANCA-228ENST00000567943 BCAP31P51572 246 aa18.48■□□□□ 0.55
FANCA-228ENST00000567943 S100A10P60903 97 aa18.48■□□□□ 0.55
FANCA-228ENST00000567943 EWSR1Q01844 656 aaKnown RBP eCLIP18.48■□□□□ 0.55
FANCA-228ENST00000567943 CYP2G1PQ6ZSU1 146 aa18.48■□□□□ 0.55
FANCA-228ENST00000567943 FNDC10F2Z333 226 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 PRAF2O60831 178 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 IL15RAQ13261 267 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 PSMG4Q5JS54 123 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 C1orf194Q5T5A4 169 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 STHQ8IWL8 128 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 C11orf1Q9H5F2 150 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 NPVFQ9HCQ7 196 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 FBXL17Q9UF56 701 aa18.47■□□□□ 0.55
FANCA-228ENST00000567943 PVALBP20472 110 aaPredicted RBP18.46■□□□□ 0.55
FANCA-228ENST00000567943 CAV2P51636 162 aa18.46■□□□□ 0.55
FANCA-228ENST00000567943 RAB32Q13637 225 aa18.46■□□□□ 0.55
FANCA-228ENST00000567943 OR8I2Q8N0Y5 310 aa18.46■□□□□ 0.55
FANCA-228ENST00000567943 OR1B1Q8NGR6 318 aa18.46■□□□□ 0.55
FANCA-228ENST00000567943 MARVELD1Q9BSK0 173 aa18.46■□□□□ 0.55
FANCA-228ENST00000567943 SLC45A2Q9UMX9 530 aa18.46■□□□□ 0.55
FANCA-228ENST00000567943 A0A0J9YWU9 116 aa18.45■□□□□ 0.54
FANCA-228ENST00000567943 LCE6AA0A183 80 aa18.45■□□□□ 0.54
FANCA-228ENST00000567943 KNCNA6PVL3 124 aa18.45■□□□□ 0.54
FANCA-228ENST00000567943 SNRPD3P62318 126 aaKnown RBP18.45■□□□□ 0.54
FANCA-228ENST00000567943 TMEM147Q9BVK8 224 aa18.45■□□□□ 0.54
FANCA-228ENST00000567943 FAM24AA6NFZ4 105 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 GOSR2O14653 212 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 SIX6O95475 246 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 TEPPQ6URK8 271 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 IL17DQ8TAD2 202 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 GGACTQ9BVM4 153 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 SLC25A22Q9H936 323 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 DOK5Q9P104 306 aa18.44■□□□□ 0.54
FANCA-228ENST00000567943 DEDDO75618 318 aa18.43■□□□□ 0.54
FANCA-228ENST00000567943 CST7O76096 145 aa18.43■□□□□ 0.54
FANCA-228ENST00000567943 CA1P00915 261 aaPredicted RBP18.43■□□□□ 0.54
FANCA-228ENST00000567943 SELENOTP62341 195 aa18.43■□□□□ 0.54
FANCA-228ENST00000567943 SLC38A11Q08AI6 406 aa18.43■□□□□ 0.54
FANCA-228ENST00000567943 ACTL10Q5JWF8 245 aa18.43■□□□□ 0.54
FANCA-228ENST00000567943 SEPSECSQ9HD40 501 aaKnown RBP18.43■□□□□ 0.54
FANCA-228ENST00000567943 ZNF98A6NK75 572 aa18.42■□□□□ 0.54
FANCA-228ENST00000567943 LINC00869P0C866 280 aa18.42■□□□□ 0.54
FANCA-228ENST00000567943 TRPT1Q86TN4 253 aaKnown RBP18.42■□□□□ 0.54
FANCA-228ENST00000567943 SLC25A32Q9H2D1 315 aa18.42■□□□□ 0.54
FANCA-228ENST00000567943 S100A7P31151 101 aa18.41■□□□□ 0.54
FANCA-228ENST00000567943 TMEM217Q8N7C4 229 aa18.41■□□□□ 0.54
FANCA-228ENST00000567943 LYRM2Q9NU23 88 aaPredicted RBP18.41■□□□□ 0.54
FANCA-228ENST00000567943 RAP2BP61225 183 aa18.4■□□□□ 0.54
FANCA-228ENST00000567943 SCRT1Q9BWW7 348 aa18.4■□□□□ 0.54
FANCA-228ENST00000567943 HIGD1AQ9Y241 93 aa18.4■□□□□ 0.54
FANCA-228ENST00000567943 IGSF23A1L1A6 192 aa18.39■□□□□ 0.53
FANCA-228ENST00000567943 HYPMO75409 117 aa18.39■□□□□ 0.53
FANCA-228ENST00000567943 GIG44P09565 113 aaPredicted RBP18.39■□□□□ 0.53
FANCA-228ENST00000567943 OR5G3P0C626 314 aa18.39■□□□□ 0.53
FANCA-228ENST00000567943 GALR1P47211 349 aa18.39■□□□□ 0.53
FANCA-228ENST00000567943 PLP1P60201 277 aa18.39■□□□□ 0.53
FANCA-228ENST00000567943 TMEM252Q8N6L7 170 aa18.39■□□□□ 0.53
FANCA-228ENST00000567943 SLC25A39Q9BZJ4 359 aaPredicted RBP18.39■□□□□ 0.53
FANCA-228ENST00000567943 H3BRN7 92 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 SOCS3O14543 225 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 AGPAT2O15120 278 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 ID1P41134 155 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 SULT1A1P50225 295 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 ZNF546Q86UE3 836 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 GATAD1Q8WUU5 269 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 LINC00052Q96N35 136 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 ARL6Q9H0F7 186 aa18.38■□□□□ 0.53
FANCA-228ENST00000567943 SSNA1O43805 119 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 PSMB3P49720 205 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 STX12Q86Y82 276 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 UHRF2Q96PU4 802 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 MGST2Q99735 147 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 SHANK2-AS3Q9BTD1 123 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 RSG1Q9BU20 258 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 NMES1Q9C002 83 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 UQCC1Q9NVA1 299 aa18.37■□□□□ 0.53
FANCA-228ENST00000567943 SPP1P10451 314 aa18.36■□□□□ 0.53
FANCA-228ENST00000567943 LRRC37A5PQ49AS3 106 aa18.36■□□□□ 0.53
FANCA-228ENST00000567943 MORN3Q6PF18 240 aaPredicted RBP18.36■□□□□ 0.53
FANCA-228ENST00000567943 GPR82Q96P67 336 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms