RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 F6UZH7 168 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 PDE6DO43924 150 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 FABP1P07148 127 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
SF3B3-206ENST00000565990 PF4V1P10720 104 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.845e-9■■■■■ 60.1
SF3B3-206ENST00000565990 SPINK9Q5DT21 86 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 LCN15Q6UWW0 184 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 RPP25LQ8N5L8 163 aaKnown RBP9.79□□□□□ -0.84
SF3B3-206ENST00000565990 USMG5Q96IX5 58 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 MS4A10Q96PG2 267 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 CITED2Q99967 270 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-206ENST00000565990 TSSC4Q9Y5U2 329 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-206ENST00000565990 RFNGQ9Y644 331 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
SF3B3-206ENST00000565990 A0A0G2JLM5 398 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 FAM223BA6NKX1 122 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 PPP1R2P9O14990 202 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 CLN5O75503 358 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 TRGV3P03979 118 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 FGF7P21781 194 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 C2orf83Q53S99 150 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 C19orf35Q6ZS72 473 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 NDUFA11Q86Y39 141 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 FAM223AQ8IWN6 122 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 SMIM7Q9BQ49 75 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 ENY2Q9NPA8 101 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 HEYLQ9NQ87 328 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-206ENST00000565990 ZNF355PQ9NSJ1 428 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 DOK5Q9P104 306 aa9.78□□□□□ -0.84
SF3B3-206ENST00000565990 NXPH3O95157 252 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 NDUFB8O95169 186 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 CXCL1P09341 107 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 DEFA4P12838 97 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 OPRK1P41145 380 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 TPPP2P59282 170 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.85
SF3B3-206ENST00000565990 FFAR4Q5NUL3 377 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 OR8G2PQ6IF36 304 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 C11orf44Q8N8P7 122 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 OR5B12Q96R08 314 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 VSIRQ9H7M9 311 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 GSN-AS1Q9NRJ2 163 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 THYN1Q9P016 225 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 FBXL7Q9UJT9 491 aa9.77□□□□□ -0.85
SF3B3-206ENST00000565990 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 C15orf62A8K5M9 175 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BKO60814 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 OR2J3O76001 311 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 TYMSP04818 313 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BJP06899 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BOP23527 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BBP33778 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 CDC34P49427 236 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-206ENST00000565990 FAM3BP58499 235 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BDP58876 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BCP62807 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 RHOGP84095 191 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST2H2BEQ16778 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 C15orf32Q32M92 178 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-206ENST00000565990 ZNF343Q6P1L6 599 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 ACSM6Q6P461 480 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 VN1R17PQ8TDU5 208 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BHQ93079 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 ACY3Q96HD9 319 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BNQ99877 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 HIST1H2BMQ99879 126 aa9.76□□□□□ -0.85
SF3B3-206ENST00000565990 H7BYZ3 331 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 I3L2K1 104 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 CORTO00230 105 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 GATCO43716 136 aaKnown RBP9.75□□□□□ -0.85
SF3B3-206ENST00000565990 CEBPGP53567 150 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 HIST2H2BDQ6DRA6 164 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 SLC24A4Q8NFF2 622 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 GNB4Q9HAV0 340 aa9.75□□□□□ -0.85
SF3B3-206ENST00000565990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.74□□□□□ -0.85
SF3B3-206ENST00000565990 K7EIM0 57 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 PHOX2AO14813 284 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
SF3B3-206ENST00000565990 IFNA10P01566 189 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 FCGR2BP31994 310 aaPredicted RBP9.74□□□□□ -0.85
SF3B3-206ENST00000565990 ELLP55199 621 aaPredicted RBP9.74□□□□□ -0.85
SF3B3-206ENST00000565990 NDUFA6P56556 154 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 RPL23P62829 140 aaKnown RBP9.74□□□□□ -0.85
SF3B3-206ENST00000565990 FAM209BQ5JX69 171 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 KCNIP4Q6PIL6 250 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 C18orf65Q6ZTR6 163 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 SSX7Q7RTT5 188 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms