RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 NPSP0C0P6 89 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 CXCL2P19875 107 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 NPY1RP25929 384 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 SNCAP37840 140 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 NKX2-5P52952 324 aaPredicted RBP4.63□□□□□ -1.67
UBFD1-204ENST00000565634 SLC35B1P78383 322 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 ZNF90Q03938 601 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 TIGITQ495A1 244 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 IL34Q6ZMJ4 242 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 NOXA1Q86UR1 476 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 TMEM252Q8N6L7 170 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 ZNF114Q8NC26 417 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 KLHL30-AS1Q8NEE0 82 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 SLC24A4Q8NFF2 622 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 OR1N2Q8NGR9 330 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 DLX4Q92988 240 aaPredicted RBP4.63□□□□□ -1.67
UBFD1-204ENST00000565634 UBE2E2Q96LR5 201 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 TMEM68Q96MH6 324 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 FAM110AQ9BQ89 295 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 MCRIP2Q9BUT9 160 aaKnown RBP4.63□□□□□ -1.67
UBFD1-204ENST00000565634 GPR61Q9BZJ8 451 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 SMIM3Q9BZL3 60 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 HIPK2Q9H2X6 1198 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 ENY2Q9NPA8 101 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 U3KQ87 197 aa4.63□□□□□ -1.67
UBFD1-204ENST00000565634 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 RNF222A6NCQ9 220 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 CCL24O00175 119 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 MED6O75586 246 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 EIF3GO75821 320 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 APOHP02749 345 aaPredicted RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 IFNA4P05014 189 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 GIPP09681 153 aaPredicted RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 GPR183P32249 361 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 HTR2BP41595 481 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 EXOSC2Q13868 293 aaKnown RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 LAMTOR1Q6IAA8 161 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 UNQ9165/PRO28630Q6UXU0 137 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 UBAC2Q8NBM4 344 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 OR11H1Q8NG94 326 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 OR2T35Q8NGX2 323 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 DCUN1D4Q92564 292 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 ACY3Q96HD9 319 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 RAB40CQ96S21 281 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 TM2D3Q9BRN9 247 aa4.62□□□□□ -1.67
UBFD1-204ENST00000565634 LYRM2Q9NU23 88 aaPredicted RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 PEF1Q9UBV8 284 aaKnown RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 STRAPQ9Y3F4 350 aaKnown RBP4.62□□□□□ -1.67
UBFD1-204ENST00000565634 IGHV3OR16-13A0A075B7E8 117 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 IGHV3-49A0A0A0MS15 119 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 IGHV3-74A0A0B4J1X5 117 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 TRAV34A0A0B4J273 112 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 ZNF320A2RRD8 509 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 A4D1N5 150 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 H3BUA1 57 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 L7N2F9 121 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 TSC22D2O75157 780 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 HSPB1P04792 205 aaKnown RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 LGALS1P09382 135 aaKnown RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 OR8U8P0C7N1 319 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 LINC00869P0C866 280 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 IGLC1P0CG04 106 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 SLC25A4P12235 298 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 RPL12P30050 165 aaKnown RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 MYCNOSP40205 109 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 OPRK1P41145 380 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 CAV2P51636 162 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 RND2P52198 227 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 AP2S1P53680 142 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 SYNJ2BPP57105 145 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 TAS2R30P59541 319 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 CYCSP99999 105 aaKnown RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 RUNX1Q01196 453 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 EWSR1Q01844 656 aaKnown RBP eCLIP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 OR2F1Q13607 317 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 KLF5Q13887 457 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 CLINT1Q14677 625 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 LGALSLQ3ZCW2 172 aaPredicted RBP4.61□□□□□ -1.67
UBFD1-204ENST00000565634 C9orf66Q5T8R8 295 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 ACOT7LQ6ZUV0 252 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 OR4X1Q8NH49 305 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 VN1R17PQ8TDU5 208 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 C4orf3Q8WVX3 66 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 CACNG8Q8WXS5 425 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 USMG5Q96IX5 58 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 SLA2Q9H6Q3 261 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 CYTL1Q9NRR1 136 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 ZFP57Q9NU63 452 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 C21orf62Q9NYP8 219 aa4.61□□□□□ -1.67
UBFD1-204ENST00000565634 FXYD6-FXYD2A0A087WZ82 144 aa4.6□□□□□ -1.67
UBFD1-204ENST00000565634 IGHV3-66A0A0C4DH42 116 aa4.6□□□□□ -1.67
UBFD1-204ENST00000565634 IZUMO1RA6ND01 250 aa4.6□□□□□ -1.67
UBFD1-204ENST00000565634 FAM223BA6NKX1 122 aa4.6□□□□□ -1.67
UBFD1-204ENST00000565634 E5RGE8 158 aa4.6□□□□□ -1.67
UBFD1-204ENST00000565634 CLN5O75503 358 aa4.6□□□□□ -1.67
UBFD1-204ENST00000565634 PRB4P10163 310 aaPredicted RBP4.6□□□□□ -1.67
UBFD1-204ENST00000565634 HIST1H1BP16401 226 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms