RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 OR5G3P0C626 314 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 RPL12P30050 165 aaKnown RBP11.98□□□□□ -0.49
RAB40C-208ENST00000564703 CAMLGP49069 296 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 C1orf194Q5T5A4 169 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 C16orf54Q6UWD8 224 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 FBXL17Q9UF56 701 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 SLC45A2Q9UMX9 530 aa11.98□□□□□ -0.49
RAB40C-208ENST00000564703 LINC00869P0C866 280 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 IGHV4-30-4P0DP06 118 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 VWC2Q2TAL6 325 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 TMEM182Q6ZP80 229 aaPredicted RBP11.97□□□□□ -0.49
RAB40C-208ENST00000564703 Q6ZRG5 221 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 OR8I2Q8N0Y5 310 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 STXBP6Q8NFX7 210 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 RNF24Q9Y225 148 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 WDR83OSQ9Y284 106 aa11.97□□□□□ -0.49
RAB40C-208ENST00000564703 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 MPDU1O75352 247 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 CLINT1Q14677 625 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 SIGLEC15Q6ZMC9 328 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 DEFB125Q8N687 156 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 B9D2Q9BPU9 175 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 ARL6Q9H0F7 186 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 DOK5Q9P104 306 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.49
RAB40C-208ENST00000564703 TRAV2A0A0B4J234 112 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 A8MZ25 164 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 LYL1P12980 280 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 FGF7P21781 194 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 PLP1P60201 277 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 ZNF709Q8N972 641 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 GLMPQ8WWB7 406 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 MGST2Q99735 147 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 UBQLN2Q9UHD9 624 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 HSPB11Q9Y547 144 aa11.95□□□□□ -0.5
RAB40C-208ENST00000564703 ELOA3CA0A087WX78 387 aaPredicted RBP11.94□□□□□ -0.5
RAB40C-208ENST00000564703 ZNF98A6NK75 572 aa11.94□□□□□ -0.5
RAB40C-208ENST00000564703 IFNA5P01569 189 aa11.94□□□□□ -0.5
RAB40C-208ENST00000564703 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
RAB40C-208ENST00000564703 OR2T35Q8NGX2 323 aa11.94□□□□□ -0.5
RAB40C-208ENST00000564703 SCGB1C1Q8TD33 95 aa11.94□□□□□ -0.5
RAB40C-208ENST00000564703 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
RAB40C-208ENST00000564703 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
RAB40C-208ENST00000564703 COX7A2P2O60397 106 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 GALR1P47211 349 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 RPL29P47914 159 aaKnown RBP11.93□□□□□ -0.5
RAB40C-208ENST00000564703 STPG3Q8N7X2 389 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 CHAC2Q8WUX2 184 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 GPR82Q96P67 336 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 ATP5SQ99766 215 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 SLC25A39Q9BZJ4 359 aaPredicted RBP11.93□□□□□ -0.5
RAB40C-208ENST00000564703 DNAJC4Q9NNZ3 241 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 NRN1Q9NPD7 142 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 C19orf73Q9NVV2 129 aa11.93□□□□□ -0.5
RAB40C-208ENST00000564703 C17orf112F2Z3M2 114 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
RAB40C-208ENST00000564703 B2MP61769 119 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 C10orf113Q5VZT2 155 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 MIC13Q5XKP0 118 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 OR1L4Q8NGR5 311 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 ASCL2Q99929 193 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 GGTLC1Q9BX51 225 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 KCNIP2Q9NS61 270 aa11.92□□□□□ -0.5
RAB40C-208ENST00000564703 K7EQG2 157 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 ID1P41134 155 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 SNRPD3P62318 126 aaKnown RBP11.91□□□□□ -0.5
RAB40C-208ENST00000564703 PFDN5Q99471 154 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 SHANK2-AS3Q9BTD1 123 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 NPCDR1Q9BY65 106 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
RAB40C-208ENST00000564703 WFDC10AQ9H1F0 79 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
RAB40C-208ENST00000564703 FXYD6-FXYD2A0A087WZ82 144 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
RAB40C-208ENST00000564703 DEFB131AP59861 70 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PRR20EP86478 221 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PRR20CP86479 221 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PRR20DP86480 221 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PRR20BP86481 221 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PRR20AP86496 221 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 OPCMLQ14982 345 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 ODF3L2Q3SX64 289 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 Q5BKY6 102 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PATE2Q6UY27 113 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 LINC00305Q7Z4B0 112 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 UHRF2Q96PU4 802 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 RSG1Q9BU20 258 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.5
RAB40C-208ENST00000564703 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
RAB40C-208ENST00000564703 H3BRN7 92 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 ZNF688P0C7X2 276 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
RAB40C-208ENST00000564703 MEOX2P50222 304 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms