RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
USB1-209ENST00000564387 RLN2P04090 185 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 S100A11P31949 105 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 PPP1R1CQ8WVI7 109 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 RNF126Q9BV68 326 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 SEPSECSQ9HD40 501 aaKnown RBP12.82□□□□□ -0.36
USB1-209ENST00000564387 OR5AC2Q9NZP5 309 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 TFPI2P48307 235 aa12.81□□□□□ -0.36
USB1-209ENST00000564387 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
USB1-209ENST00000564387 SIGLEC15Q6ZMC9 328 aa12.81□□□□□ -0.36
USB1-209ENST00000564387 FAM24BQ8N5W8 94 aa12.81□□□□□ -0.36
USB1-209ENST00000564387 CHAC2Q8WUX2 184 aa12.81□□□□□ -0.36
USB1-209ENST00000564387 WDR83OSQ9Y284 106 aa12.81□□□□□ -0.36
USB1-209ENST00000564387 LOC102724200A0A096LPH7 203 aaPredicted RBP12.8□□□□□ -0.36
USB1-209ENST00000564387 AGPAT2O15120 278 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 CXCL3P19876 107 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 OXA1LQ15070 435 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 ATP6V1FQ16864 119 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 RGS21Q2M5E4 152 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 STX12Q86Y82 276 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 TMEM217Q8N7C4 229 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 STXBP6Q8NFX7 210 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 GGTLC1Q9BX51 225 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 ZMAT4Q9H898 229 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 FBXL17Q9UF56 701 aa12.8□□□□□ -0.36
USB1-209ENST00000564387 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 MPC2O95563 127 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 LINC00869P0C866 280 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 HBG1P69891 147 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 HBG2P69892 147 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 PXDC1Q5TGL8 231 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 ZNF546Q86UE3 836 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 APRG1Q8IVJ8 170 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 RCHY1Q96PM5 261 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 MGST2Q99735 147 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 SPATA25Q9BR10 227 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 SLC25A31Q9H0C2 315 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 UQCC1Q9NVA1 299 aa12.79□□□□□ -0.36
USB1-209ENST00000564387 KIR2DL5BA0A0G2JN68 375 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 KIR2DL5BA0A0G2JPC4 375 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 LYL1P12980 280 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 ORM2P19652 201 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 S100A7P31151 101 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 EWSR1Q01844 656 aaKnown RBP eCLIP12.78□□□□□ -0.36
USB1-209ENST00000564387 BAXQ07812 192 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 LRRC37A5PQ49AS3 106 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 PATE2Q6UY27 113 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 KIR2DL5AQ8N109 375 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 OR11H7Q8NGC8 314 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 TMEM147Q9BVK8 224 aa12.78□□□□□ -0.36
USB1-209ENST00000564387 H3BRN7 92 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 HYPMO75409 117 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 PET100P0DJ07 73 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 DEFB131AP59861 70 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 PRR20EP86478 221 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 PRR20CP86479 221 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 PRR20DP86480 221 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 PRR20BP86481 221 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 PRR20AP86496 221 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 NHLH2Q02577 135 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 ZNF124Q15973 351 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
USB1-209ENST00000564387 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
USB1-209ENST00000564387 SOCS3O14543 225 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 FCN2Q15485 313 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 OR8I2Q8N0Y5 310 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 WWC2-AS2Q96NR7 200 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 GPR82Q96P67 336 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 MED28Q9H204 178 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 HIGD1AQ9Y241 93 aa12.76□□□□□ -0.37
USB1-209ENST00000564387 UBE2CO00762 179 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 MPDU1O75352 247 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
USB1-209ENST00000564387 CAMLGP49069 296 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 APOC4P55056 127 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 RAB31Q13636 194 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 Q6ZWC4 215 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 OR5C1Q8NGR4 320 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 ASB13Q8WXK3 278 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 PPP1R14BQ96C90 147 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 ARL6Q9H0F7 186 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 SLC25A32Q9H2D1 315 aa12.75□□□□□ -0.37
USB1-209ENST00000564387 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 RAP2BP61225 183 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 OPCMLQ14982 345 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 S100A7AQ86SG5 101 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 TMEM37Q8WXS4 190 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 DOK5Q9P104 306 aa12.74□□□□□ -0.37
USB1-209ENST00000564387 ELOA3CA0A087WX78 387 aaPredicted RBP12.73□□□□□ -0.37
USB1-209ENST00000564387 UBE2L5PA0A1B0GUS4 154 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 GALR1P47211 349 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 SNRPD3P62318 126 aaKnown RBP12.73□□□□□ -0.37
USB1-209ENST00000564387 SAMD13Q5VXD3 122 aa12.73□□□□□ -0.37
USB1-209ENST00000564387 LEMD1Q68G75 181 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms