RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 BTNL8Q6UX41 500 aa11.64□□□□□ -0.55
RNF40-205ENST00000563909 OR1S2Q8NGQ3 325 aa11.64□□□□□ -0.55
RNF40-205ENST00000563909 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
RNF40-205ENST00000563909 A8MWP6 167 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 H0YIZ8 118 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 DEFB4AO15263 64 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 OR10J1P30954 320 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 DLK1P80370 383 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 FGL1Q08830 312 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 ZNF600Q6ZNG1 722 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 Q6ZNX1 250 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
RNF40-205ENST00000563909 STX12Q86Y82 276 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 TMEM252Q8N6L7 170 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 THAP6Q8TBB0 222 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 GGACTQ9BVM4 153 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 SLC25A31Q9H0C2 315 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 MAP6D1Q9H9H5 199 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 SCRT2Q9NQ03 307 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 OR5AC2Q9NZP5 309 aa11.63□□□□□ -0.55
RNF40-205ENST00000563909 TRAV25A0A0B4J276 109 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 C11orf94C9JXX5 98 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 FNDC10F2Z333 226 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 CCNKO75909 580 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 IGLC1P0CG04 106 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 SULT1A1P50225 295 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
RNF40-205ENST00000563909 RAP2BP61225 183 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
RNF40-205ENST00000563909 ACOT7LQ6ZUV0 252 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 POM121L12Q8N7R1 296 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
RNF40-205ENST00000563909 ZFP92A6NM28 416 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 CST7O76096 145 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 YIF1AO95070 293 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 IGKV1-17P01599 117 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 FABP1P07148 127 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 S100A11P31949 105 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 HBG1P69891 147 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 HBG2P69892 147 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 AKR1C1Q04828 323 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 TIGITQ495A1 244 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 Q8WTZ3 238 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 MARC2Q969Z3 335 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 NPVFQ9HCQ7 196 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 MBD2Q9UBB5 411 aa11.61□□□□□ -0.55
RNF40-205ENST00000563909 IGHV4-4A0A075B6R2 117 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 IGSF23A1L1A6 192 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 SMCO3A2RU48 225 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 K7EMT4 169 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 ARL16Q0P5N6 197 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 TMEM144Q7Z5S9 345 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 THAP8Q8NA92 274 aa11.6□□□□□ -0.55
RNF40-205ENST00000563909 PUS1Q9Y606 427 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF40-205ENST00000563909 TRAV14DV4A0A0A6YYC5 116 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 BAXQ07812 192 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 TRGV9Q99603 122 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 SPAG8Q99932 426 aaPredicted RBP11.59□□□□□ -0.55
RNF40-205ENST00000563909 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
RNF40-205ENST00000563909 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
RNF40-205ENST00000563909 MRPL27Q9P0M9 148 aaKnown RBP11.59□□□□□ -0.55
RNF40-205ENST00000563909 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
RNF40-205ENST00000563909 TOMM40O96008 361 aa11.58□□□□□ -0.56
RNF40-205ENST00000563909 RD3LP0DJH9 198 aa11.58□□□□□ -0.56
RNF40-205ENST00000563909 ZNF414Q96IQ9 312 aa11.58□□□□□ -0.56
RNF40-205ENST00000563909 CSTL1Q9H114 145 aa11.58□□□□□ -0.56
RNF40-205ENST00000563909 SRRM2Q9UQ35 2752 aaKnown RBP11.58□□□□□ -0.56
RNF40-205ENST00000563909 P0DMU3 169 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 FAM231AP0DMU4 169 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 FAM231CP0DMU5 169 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 RPL12P30050 165 aaKnown RBP11.57□□□□□ -0.56
RNF40-205ENST00000563909 NHLH2Q02577 135 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 TEPPQ6URK8 271 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 OR2T35Q8NGX2 323 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 CHAC2Q8WUX2 184 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 TMEM147Q9BVK8 224 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 ZFAND3Q9H8U3 227 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 UQCC1Q9NVA1 299 aa11.57□□□□□ -0.56
RNF40-205ENST00000563909 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
RNF40-205ENST00000563909 IGHV3OR16-8A0A075B7F1 116 aa11.56□□□□□ -0.56
RNF40-205ENST00000563909 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
RNF40-205ENST00000563909 PSG1P11464 419 aa11.56□□□□□ -0.56
RNF40-205ENST00000563909 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
RNF40-205ENST00000563909 ZNF90Q03938 601 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms