RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ST8SIA2Q92186 375 aa14.25□□□□□ -0.13
RAB40C-207ENST00000563109 ARL6Q9H0F7 186 aa14.25□□□□□ -0.13
RAB40C-207ENST00000563109 PXMP4Q9Y6I8 212 aa14.25□□□□□ -0.13
RAB40C-207ENST00000563109 IGHV3-66A0A0C4DH42 116 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 A0A0D9SG52 128 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 COX7A2P2O60397 106 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 OR5G3P0C626 314 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 PLP1P60201 277 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 DEFB114Q30KQ6 69 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 LAMTOR1Q6IAA8 161 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 VSIRQ9H7M9 311 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 SLC39A9Q9NUM3 307 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 HIGD1AQ9Y241 93 aa14.24□□□□□ -0.13
RAB40C-207ENST00000563109 APOHP02749 345 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-207ENST00000563109 CD5P06127 495 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 PRR20EP86478 221 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 PRR20CP86479 221 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 PRR20DP86480 221 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 PRR20BP86481 221 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 PRR20AP86496 221 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 CD300EQ496F6 205 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-207ENST00000563109 ZFP69Q49AA0 526 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 RBPMS2Q6ZRY4 209 aaKnown RBP14.23□□□□□ -0.13
RAB40C-207ENST00000563109 KCNRGQ8N5I3 272 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 OR1L4Q8NGR5 311 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 HYLS1Q96M11 299 aa14.23□□□□□ -0.13
RAB40C-207ENST00000563109 ELOA3CA0A087WX78 387 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-207ENST00000563109 KANTRA0A1W2PQU2 76 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 PFDN5Q99471 154 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 RNF2Q99496 336 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 ARPC5LQ9BPX5 153 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 NEURL2Q9BR09 285 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 RSG1Q9BU20 258 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 RNF24Q9Y225 148 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 SELENOKQ9Y6D0 94 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 U3KQE9 123 aa14.22□□□□□ -0.13
RAB40C-207ENST00000563109 TRAV25A0A0B4J276 109 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 PFDN1O60925 122 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 EGFEM1PQ0D2K5 195 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 C10orf113Q5VZT2 155 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 RPL7L1Q6DKI1 246 aaKnown RBP14.21□□□□□ -0.13
RAB40C-207ENST00000563109 TCF24Q7RTU0 167 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 TMEM61Q8N0U2 210 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 ARV1Q9H2C2 271 aa14.21□□□□□ -0.13
RAB40C-207ENST00000563109 HELTA6NFD8 242 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 JTBO76095 146 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 CXCL2P19875 107 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 RPL11P62913 178 aaKnown RBP14.2□□□□□ -0.14
RAB40C-207ENST00000563109 CD300CQ08708 224 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 GUCA2BQ16661 112 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 BEAN1Q3B7T3 259 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 C1orf194Q5T5A4 169 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 C16orf54Q6UWD8 224 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 HSD17B11Q8NBQ5 300 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 TIMM9Q9Y5J7 89 aa14.2□□□□□ -0.14
RAB40C-207ENST00000563109 PKD1L1Q8TDX9 2849 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 H3BRN7 92 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 BCL2L11O43521 198 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 BUB3O43684 328 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 FFAR4Q5NUL3 377 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 KPRPQ5T749 579 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-207ENST00000563109 GLMPQ8WWB7 406 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 SHANK2-AS3Q9BTD1 123 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 SLC25A39Q9BZJ4 359 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-207ENST00000563109 SLC25A22Q9H936 323 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 DNAJC4Q9NNZ3 241 aa14.19□□□□□ -0.14
RAB40C-207ENST00000563109 ZNF256Q9Y2P7 627 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-207ENST00000563109 IZUMO1RA6ND01 250 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 ZNF98A6NK75 572 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 TSPAN4O14817 238 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 GP9P14770 177 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 PAFAH1B2P68402 229 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 SIGLEC15Q6ZMC9 328 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 TMUB2Q71RG4 321 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 LINC00305Q7Z4B0 112 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 OR8I2Q8N0Y5 310 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 GATAD1Q8WUU5 269 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 GNPNAT1Q96EK6 184 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-207ENST00000563109 UHRF2Q96PU4 802 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 SPAG8Q99932 426 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-207ENST00000563109 PSMG3Q9BT73 122 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-207ENST00000563109 SCRT1Q9BWW7 348 aa14.18□□□□□ -0.14
RAB40C-207ENST00000563109 ATP6V0CP27449 155 aa14.17□□□□□ -0.14
RAB40C-207ENST00000563109 PATE2Q6UY27 113 aa14.17□□□□□ -0.14
RAB40C-207ENST00000563109 GPR82Q96P67 336 aa14.17□□□□□ -0.14
RAB40C-207ENST00000563109 ZNF471Q9BX82 626 aaPredicted RBP14.17□□□□□ -0.14
RAB40C-207ENST00000563109 IGKV3-7A0A075B6H7 116 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 OR4C46A6NHA9 309 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 C4BPBP20851 252 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 GALR1P47211 349 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 KRTAP10-11P60412 298 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 EIF5AP63241 154 aaKnown RBP14.16□□□□□ -0.14
RAB40C-207ENST00000563109 ACOT6Q3I5F7 207 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-207ENST00000563109 FAM90A2PQ658T7 463 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 TMEM37Q8WXS4 190 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 CYTL1Q9NRR1 136 aa14.16□□□□□ -0.14
RAB40C-207ENST00000563109 NOTCH3Q9UM47 2321 aa14.15□□□□□ -0.14
RAB40C-207ENST00000563109 DNASE2O00115 360 aaPredicted RBP14.15□□□□□ -0.14
RAB40C-207ENST00000563109 LEMD1Q68G75 181 aa14.15□□□□□ -0.14
RAB40C-207ENST00000563109 GTSCR1Q86UQ5 136 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms