RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 IGHV3-11P01762 117 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 TRGV3P03979 118 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 SULT1A3P0DMM9 295 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 SULT1A4P0DMN0 295 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 FCGR2BP31994 310 aaPredicted RBP3.4□□□□□ -1.87
SMG1-206ENST00000562668 MYCNOSP40205 109 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 PAX9P55771 341 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 RAB25P57735 213 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 TPPP2P59282 170 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 SPCS3P61009 180 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 RHOGP84095 191 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 TNFRSF9Q07011 255 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 OXA1LQ15070 435 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 C15orf32Q32M92 178 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 IL34Q6ZMJ4 242 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 Q8N377 158 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 C12orf45Q8N5I9 185 aaPredicted RBP3.4□□□□□ -1.87
SMG1-206ENST00000562668 MAPKAPK5-AS1Q8N8E1 139 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 NECAP1Q8NC96 275 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 KLHL30-AS1Q8NEE0 82 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 OR11H1Q8NG94 326 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 OR1P1Q8NH06 330 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 ZNF502Q8TBZ5 544 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 ENKURQ8TC29 256 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 USMG5Q96IX5 58 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 OR5B12Q96R08 314 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 RBKSQ9H477 322 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 FNDC4Q9H6D8 234 aaPredicted RBP3.4□□□□□ -1.87
SMG1-206ENST00000562668 A8MU10 97 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 SNRPGP15A8MWD9 76 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 PPP5D1E7EU14 171 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 CCL24O00175 119 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 SOCS3O14543 225 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 CCSO14618 274 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 IGHV3-23P01764 117 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 HSPB1P04792 205 aaKnown RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 DNAH10OSP0CZ25 163 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 HIST1H1BP16401 226 aaKnown RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 DEFA1P59665 94 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 DEFA3P59666 94 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 ATP5G2Q06055 141 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 ZNF616Q08AN1 781 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 EXOSC2Q13868 293 aaKnown RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 KLF5Q13887 457 aaPredicted RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 C2orf83Q53S99 150 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 KPRPQ5T749 579 aaPredicted RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 ADAMTSL5Q6ZMM2 481 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 OR4F17Q8NGA8 305 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 OR1N2Q8NGR9 330 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 COQ8AQ8NI60 647 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 DTD1Q8TEA8 209 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 DLX4Q92988 240 aaPredicted RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 OR4C12Q96R67 309 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 OR4F4Q96R69 305 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 ATP6V0BQ99437 205 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 HINT2Q9BX68 163 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 PLEKHA3Q9HB20 300 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 ZNF355PQ9NSJ1 428 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 PEF1Q9UBV8 284 aaKnown RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
SMG1-206ENST00000562668 S4R3C0 116 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 FBN3Q75N90 2809 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 NBEAL1Q6ZS30 2694 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 WNK1Q9H4A3 2382 aa3.39□□□□□ -1.87
SMG1-206ENST00000562668 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 PIGBOS1A0A0B4J2F0 54 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 A0A0G2JLM5 398 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 C13orf42A0A1B0GVH6 325 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 EPM2AB3EWF7 344 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 LINC01619G3V211 115 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 G3V4G9 280 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 SYNGR2O43760 224 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 PRAF2O60831 178 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 DFFBO76075 338 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 MT-CO2P00403 227 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 IFNA17P01571 189 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 CTSGP08311 255 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 HTR2BP41595 481 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 H2BFSP57053 126 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 POLR2GP62487 172 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMG1-206ENST00000562668 ERHP84090 104 aaKnown RBP3.38□□□□□ -1.87
SMG1-206ENST00000562668 TATDN3Q17R31 274 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 IAH1Q2TAA2 248 aaPredicted RBP3.38□□□□□ -1.87
SMG1-206ENST00000562668 SLC25A24Q6NUK1 477 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 PLET1Q6UQ28 207 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 TMEM14EPQ6UXP3 125 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 Q6ZRP5 223 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 OR1L6Q8NGR2 347 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 OR1S1Q8NH92 325 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 RNASE11Q8TAA1 199 aaKnown RBP3.38□□□□□ -1.87
SMG1-206ENST00000562668 DCUN1D4Q92564 292 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 CHRDL1Q9BU40 450 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 ZNF436Q9C0F3 470 aaPredicted RBP3.38□□□□□ -1.87
SMG1-206ENST00000562668 MAGT1Q9H0U3 335 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 ALG5Q9Y673 324 aa3.38□□□□□ -1.87
SMG1-206ENST00000562668 MGAM2Q2M2H8 2515 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms