RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 TCF24Q7RTU0 167 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 GTSCR1Q86UQ5 136 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 PPP1R14BQ96C90 147 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 PRR25Q96S07 402 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 NEURL2Q9BR09 285 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 RNF24Q9Y225 148 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 SELENOKQ9Y6D0 94 aa12.31□□□□□ -0.44
USB1-206ENST00000562534 SORL1Q92673 2214 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 FXYD6-FXYD2A0A087WZ82 144 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 HELTA6NFD8 242 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 ZNF709Q8N972 641 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 SCGB1C1Q8TD33 95 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 ARL6Q9H0F7 186 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
USB1-206ENST00000562534 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
USB1-206ENST00000562534 OR5G3P0C626 314 aa12.29□□□□□ -0.44
USB1-206ENST00000562534 CMC4P56277 68 aaPredicted RBP12.29□□□□□ -0.44
USB1-206ENST00000562534 GGTLC1Q9BX51 225 aa12.29□□□□□ -0.44
USB1-206ENST00000562534 SMIM3Q9BZL3 60 aa12.29□□□□□ -0.44
USB1-206ENST00000562534 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
USB1-206ENST00000562534 TNFSF18Q9UNG2 199 aa12.29□□□□□ -0.44
USB1-206ENST00000562534 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
USB1-206ENST00000562534 NOTCH1P46531 2555 aa12.29□□□□□ -0.44
USB1-206ENST00000562534 OR4C46A6NHA9 309 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 C17orf112F2Z3M2 114 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
USB1-206ENST00000562534 PRR20EP86478 221 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 PRR20CP86479 221 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 PRR20DP86480 221 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 PRR20BP86481 221 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 PRR20AP86496 221 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 OPCMLQ14982 345 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 Q8N1Y9 231 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 GLMPQ8WWB7 406 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 NPCDR1Q9BY65 106 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
USB1-206ENST00000562534 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 KCNIP2Q9NS61 270 aa12.28□□□□□ -0.44
USB1-206ENST00000562534 TRAV2A0A0B4J234 112 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 ZNF98A6NK75 572 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 G3V3Q6 166 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 K7EIL1 84 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 B2MP61769 119 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 ZNF266Q14584 549 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 MIC13Q5XKP0 118 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 OR8I2Q8N0Y5 310 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 STPG3Q8N7X2 389 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 OR1L4Q8NGR5 311 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 MRAPQ8TCY5 172 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 GPR82Q96P67 336 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 SLC25A39Q9BZJ4 359 aaPredicted RBP12.27□□□□□ -0.45
USB1-206ENST00000562534 ARV1Q9H2C2 271 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 DOK5Q9P104 306 aa12.27□□□□□ -0.45
USB1-206ENST00000562534 IGKV3-7A0A075B6H7 116 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 HMSDA8MTL9 139 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 COX7A2P2O60397 106 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 CD81P60033 236 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 C10orf113Q5VZT2 155 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 PATE2Q6UY27 113 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 SIGLEC15Q6ZMC9 328 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 GBGT1Q8N5D6 347 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 PFDN5Q99471 154 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 WFDC1Q9HC57 220 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 PXMP4Q9Y6I8 212 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 SMAD5-AS1Q9Y6J3 95 aa12.26□□□□□ -0.45
USB1-206ENST00000562534 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 SMLR1H3BR10 107 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 TAAR5O14804 337 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 GATAD1Q8WUU5 269 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 FAM110AQ9BQ89 295 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 MFFQ9GZY8 342 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
USB1-206ENST00000562534 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 H3BRN7 92 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 ARPC5O15511 151 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 CD7P09564 240 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 GALR1P47211 349 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 TFPI2P48307 235 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 LINC00305Q7Z4B0 112 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 WFDC3Q8IUB2 231 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 TCTE3Q8IZS6 198 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 STXBP6Q8NFX7 210 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 SLC25A22Q9H936 323 aa12.24□□□□□ -0.45
USB1-206ENST00000562534 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
USB1-206ENST00000562534 OR11H12B2RN74 326 aa12.23□□□□□ -0.45
USB1-206ENST00000562534 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
USB1-206ENST00000562534 UHRF2Q96PU4 802 aa12.23□□□□□ -0.45
USB1-206ENST00000562534 SEPSECSQ9HD40 501 aaKnown RBP12.23□□□□□ -0.45
USB1-206ENST00000562534 NRN1Q9NPD7 142 aa12.23□□□□□ -0.45
USB1-206ENST00000562534 A0A0D9SG52 128 aa12.22□□□□□ -0.45
USB1-206ENST00000562534 A8MZ25 164 aa12.22□□□□□ -0.45
USB1-206ENST00000562534 K7EQG2 157 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms