RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PITX3O75364 302 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 ID1P41134 155 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 OR2F1Q13607 317 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 FAM222AQ5U5X8 452 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PLA2G2EQ9NZK7 142 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 SNRPGP15A8MWD9 76 aa11.88□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PAX9P55771 341 aa11.88□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 SRPXP78539 464 aa11.88□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 C1orf158Q8N1D5 194 aa11.88□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 RSL24D1Q9UHA3 163 aaKnown RBP11.88□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 A0A0J9YX75 114 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 ISLRO14498 428 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 IAPPP10997 89 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 ANXA3P12429 323 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PSG9Q00887 426 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 LGALS9BQ3B8N2 356 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 C17orf77Q96MU5 243 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TRGV9Q99603 122 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 SOSTQ9BQB4 213 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 ABCA13Q86UQ4 5058 aa11.87□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 FABP1P07148 127 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 RAB2BQ8WUD1 216 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PPP1R14BQ96C90 147 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 FAM210BQ96KR6 192 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 SLIRPQ9GZT3 109 aaKnown RBP11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 GOLT1BQ9Y3E0 138 aa11.86□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 IGLV2-18A0A075B6J9 118 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 DUXBA0A1W2PPF3 345 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PRSS46E5RG02 174 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 IFNA21P01568 189 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 MED14OSP0DP75 135 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TNFSF8P32971 234 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 EBLN2Q6P2I7 272 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 Q6ZR54 194 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TMED4Q7Z7H5 227 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 SLC25A32Q9H2D1 315 aa11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 YTHDF2Q9Y5A9 579 aaKnown RBP11.85□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 FABP12A6NFH5 140 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 A8MTW9 85 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 HBE1P02100 147 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 HTN3P15516 51 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TMBIM6P55061 237 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 RAB11AP62491 216 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 OXA1LQ15070 435 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 UBE2DNLQ8IWF7 75 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TRIM63Q969Q1 353 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 C16orf92Q96LL3 132 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 C7orf50Q9BRJ6 194 aaKnown RBP11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 RPRMQ9NS64 109 aa11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 TMEM182Q6ZP80 229 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 BCL7BQ9BQE9 202 aa11.83□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 DOK5Q9P104 306 aa11.83□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 PIGBOS1A0A0B4J2F0 54 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 ZNF98A6NK75 572 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 SLC25A6P12236 298 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 GALR1P47211 349 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 MEOX2P50222 304 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 RRN3P1Q2M238 152 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 RSG1Q9BU20 258 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 MAGT1Q9H0U3 335 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 WRBO00258 174 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 CFDP00746 253 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 PRM2P04554 102 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 VAMP1P23763 118 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 RNF212Q495C1 297 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 GGNBP1Q5YKI7 109 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 IGFL4Q6B9Z1 124 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 TMEM88Q6PEY1 159 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 IGF2BP2-AS1Q96M15 143 aa11.81□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 TRAV8-2A0A0B4J237 113 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 H3BMQ9 156 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 CRXO43186 299 aaPredicted RBP11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 SYNGR2O43760 224 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 MED6O75586 246 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 ORM2P19652 201 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 FAUP35544 74 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 CNN1P51911 297 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 DAD1P61803 113 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 PPP1R1AQ13522 171 aa11.8□□□□□ -0.52
VPS9D1-AS1-201ENST00000562298 OR4D5Q8NGN0 318 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms