RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GNPNAT1Q96EK6 184 aaPredicted RBP2.56□□□□□ -2
SMG1-204ENST00000561940 DNAJC30Q96LL9 226 aa2.56□□□□□ -2
SMG1-204ENST00000561940 ZNF471Q9BX82 626 aaPredicted RBP2.56□□□□□ -2
SMG1-204ENST00000561940 REG4Q9BYZ8 158 aa2.56□□□□□ -2
SMG1-204ENST00000561940 CADP27708 2225 aa2.56□□□□□ -2
SMG1-204ENST00000561940 USF3Q68DE3 2245 aa2.56□□□□□ -2
SMG1-204ENST00000561940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.55□□□□□ -2
SMG1-204ENST00000561940 A0A1W2PQL4 384 aaPredicted RBP2.55□□□□□ -2
SMG1-204ENST00000561940 OR4C45A6NMZ5 311 aa2.55□□□□□ -2
SMG1-204ENST00000561940 C9JCJ5 164 aa2.55□□□□□ -2
SMG1-204ENST00000561940 NPYP01303 97 aa2.55□□□□□ -2
SMG1-204ENST00000561940 HIST1H1EP10412 219 aaKnown RBP2.55□□□□□ -2
SMG1-204ENST00000561940 CD24P25063 80 aa2.55□□□□□ -2
SMG1-204ENST00000561940 XCL1P47992 114 aa2.55□□□□□ -2
SMG1-204ENST00000561940 RBM11P57052 281 aaKnown RBP2.55□□□□□ -2
SMG1-204ENST00000561940 TAS2R20P59543 309 aa2.55□□□□□ -2
SMG1-204ENST00000561940 MYL6P60660 151 aa2.55□□□□□ -2
SMG1-204ENST00000561940 CAV1Q03135 178 aa2.55□□□□□ -2
SMG1-204ENST00000561940 PRDX4Q13162 271 aa2.55□□□□□ -2
SMG1-204ENST00000561940 ZNF720Q7Z2F6 126 aa2.55□□□□□ -2
SMG1-204ENST00000561940 ZNF550Q7Z398 422 aa2.55□□□□□ -2
SMG1-204ENST00000561940 OR5B17Q8NGF7 314 aa2.55□□□□□ -2
SMG1-204ENST00000561940 OR13C8Q8NGS7 320 aa2.55□□□□□ -2
SMG1-204ENST00000561940 PATE1Q8WXA2 126 aa2.55□□□□□ -2
SMG1-204ENST00000561940 PPP1R14BQ96C90 147 aa2.55□□□□□ -2
SMG1-204ENST00000561940 MRPS24Q96EL2 167 aaKnown RBP2.55□□□□□ -2
SMG1-204ENST00000561940 IMP4Q96G21 291 aaKnown RBP2.55□□□□□ -2
SMG1-204ENST00000561940 NMNAT3Q96T66 252 aa2.55□□□□□ -2
SMG1-204ENST00000561940 TTTY13Q9BZ97 58 aa2.55□□□□□ -2
SMG1-204ENST00000561940 OR51I1Q9H343 314 aa2.55□□□□□ -2
SMG1-204ENST00000561940 GPR84Q9NQS5 396 aa2.55□□□□□ -2
SMG1-204ENST00000561940 ANAPC10Q9UM13 185 aa2.55□□□□□ -2
SMG1-204ENST00000561940 PXMP4Q9Y6I8 212 aa2.55□□□□□ -2
SMG1-204ENST00000561940 MYH10P35580 1976 aa2.54□□□□□ -2
SMG1-204ENST00000561940 KMT2CQ8NEZ4 4911 aaKnown RBP2.54□□□□□ -2
SMG1-204ENST00000561940 ZANQ9Y493 2812 aa2.54□□□□□ -2
SMG1-204ENST00000561940 A0A0G2JQZ4 141 aa2.54□□□□□ -2
SMG1-204ENST00000561940 IFNA16P05015 189 aa2.54□□□□□ -2
SMG1-204ENST00000561940 SERPINA6P08185 405 aa2.54□□□□□ -2
SMG1-204ENST00000561940 ZNF728P0DKX0 622 aa2.54□□□□□ -2
SMG1-204ENST00000561940 ZNF140P52738 457 aaPredicted RBP2.54□□□□□ -2
SMG1-204ENST00000561940 HIST2H3PS2Q5TEC6 136 aa2.54□□□□□ -2
SMG1-204ENST00000561940 C22orf39Q6P5X5 142 aa2.54□□□□□ -2
SMG1-204ENST00000561940 SLC35F6Q8N357 371 aa2.54□□□□□ -2
SMG1-204ENST00000561940 SLC22A24Q8N4F4 322 aa2.54□□□□□ -2
SMG1-204ENST00000561940 C12orf29Q8N999 325 aa2.54□□□□□ -2
SMG1-204ENST00000561940 BIRC6Q9NR09 4857 aa2.54□□□□□ -2
SMG1-204ENST00000561940 A0A087WUU8 490 aa2.53□□□□□ -2
SMG1-204ENST00000561940 A0A1W2PQD3 144 aa2.53□□□□□ -2
SMG1-204ENST00000561940 C2orf74A8MZ97 194 aa2.53□□□□□ -2
SMG1-204ENST00000561940 TXNDC9O14530 226 aa2.53□□□□□ -2
SMG1-204ENST00000561940 COX7A2LO14548 114 aa2.53□□□□□ -2
SMG1-204ENST00000561940 RPP14O95059 124 aaKnown RBP2.53□□□□□ -2
SMG1-204ENST00000561940 STATHP02808 62 aa2.53□□□□□ -2
SMG1-204ENST00000561940 CCL1P22362 96 aa2.53□□□□□ -2
SMG1-204ENST00000561940 OMPP47874 163 aa2.53□□□□□ -2
SMG1-204ENST00000561940 SULT1A1P50225 295 aa2.53□□□□□ -2
SMG1-204ENST00000561940 FXYD7P58549 80 aa2.53□□□□□ -2
SMG1-204ENST00000561940 AP1S1P61966 158 aa2.53□□□□□ -2
SMG1-204ENST00000561940 DCDP81605 110 aaKnown RBP2.53□□□□□ -2
SMG1-204ENST00000561940 AKR1C1Q04828 323 aa2.53□□□□□ -2
SMG1-204ENST00000561940 LRRC75BQ2VPJ9 315 aa2.53□□□□□ -2
SMG1-204ENST00000561940 C6orf52Q5T4I8 152 aa2.53□□□□□ -2
SMG1-204ENST00000561940 C8orf74Q6P047 294 aa2.53□□□□□ -2
SMG1-204ENST00000561940 AGTRAPQ6RW13 159 aa2.53□□□□□ -2
SMG1-204ENST00000561940 OR1M1Q8NGA1 313 aa2.53□□□□□ -2
SMG1-204ENST00000561940 OR4X1Q8NH49 305 aa2.53□□□□□ -2
SMG1-204ENST00000561940 CLDND2Q8NHS1 167 aa2.53□□□□□ -2
SMG1-204ENST00000561940 CCDC42Q96M95 316 aa2.53□□□□□ -2
SMG1-204ENST00000561940 CCL19Q99731 98 aa2.53□□□□□ -2
SMG1-204ENST00000561940 TXNDC17Q9BRA2 123 aa2.53□□□□□ -2
SMG1-204ENST00000561940 MED29Q9NX70 200 aa2.53□□□□□ -2
SMG1-204ENST00000561940 COQ4Q9Y3A0 265 aa2.53□□□□□ -2
SMG1-204ENST00000561940 LY6LH3BQJ8 138 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 SERPINA7P05543 415 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 OR5G3P0C626 314 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 MAP2K4P45985 399 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 CAPZBP47756 277 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 OR2F1Q13607 317 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 SFXN4Q6P4A7 337 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 UMODL1-AS1Q8N2C9 162 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 DEFB125Q8N687 156 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 SMCR5Q8TEV8 140 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 PSMF1Q92530 271 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 ROPN1LQ96C74 230 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 Q9BRP9 147 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 PARD6GQ9BYG4 376 aaPredicted RBP2.52□□□□□ -2.01
SMG1-204ENST00000561940 CXorf21Q9HAI6 301 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 TAAR3PQ9P1P4 343 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 ANGPT4Q9Y264 503 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 FAM215AQ9Y5M1 114 aa2.52□□□□□ -2.01
SMG1-204ENST00000561940 OVOL1O14753 267 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 PIN1P1O15428 100 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 CDKN2CP42773 168 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 SPCS3P61009 180 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 SNRPFP62306 86 aaKnown RBP2.51□□□□□ -2.01
SMG1-204ENST00000561940 POLR2GP62487 172 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMG1-204ENST00000561940 TBC1D19Q8N5T2 526 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 ZNF565Q8N9K5 539 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 OR4X2Q8NGF9 303 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms