RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 UBE2L5PA0A1B0GUS4 154 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 HELTA6NFD8 242 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 LINC00869P0C866 280 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 S100A11P31949 105 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 HBG1P69891 147 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 HBG2P69892 147 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 EWSR1Q01844 656 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMPD3-202ENST00000561749 APRG1Q8IVJ8 170 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 MGST2Q99735 147 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 TMEM147Q9BVK8 224 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 SLC25A31Q9H0C2 315 aa17.4■□□□□ 0.38
SMPD3-202ENST00000561749 AGPAT2O15120 278 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 NUP62P37198 522 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-202ENST00000561749 SELENOTP62341 195 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 ZNF124Q15973 351 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 SIGLEC15Q6ZMC9 328 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 MAP6D1Q9H9H5 199 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 MBD2Q9UBB5 411 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 PFDN2Q9UHV9 154 aa17.39■□□□□ 0.37
SMPD3-202ENST00000561749 K7EQG2 157 aa17.38■□□□□ 0.37
SMPD3-202ENST00000561749 PET100P0DJ07 73 aa17.38■□□□□ 0.37
SMPD3-202ENST00000561749 HAGHQ16775 308 aa17.38■□□□□ 0.37
SMPD3-202ENST00000561749 WDR83OSQ9Y284 106 aa17.38■□□□□ 0.37
SMPD3-202ENST00000561749 OR5G3P0C626 314 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 BAXQ07812 192 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 VWC2Q2TAL6 325 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 LINC00322Q6ZN03 302 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-202ENST00000561749 ZNF546Q86UE3 836 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 OR5C1Q8NGR4 320 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 SLC25A22Q9H936 323 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 SLC45A2Q9UMX9 530 aa17.37■□□□□ 0.37
SMPD3-202ENST00000561749 TRAV2A0A0B4J234 112 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 NHLRC4P0CG21 123 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-202ENST00000561749 CAMLGP49069 296 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 CLINT1Q14677 625 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 ATP6V1FQ16864 119 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 LEMD1Q68G75 181 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 OR8I2Q8N0Y5 310 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 DCANP1Q8TF63 244 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 SCRT1Q9BWW7 348 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 ARL6Q9H0F7 186 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 HIGD1AQ9Y241 93 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 DNAH9Q9NYC9 4486 aa17.36■□□□□ 0.37
SMPD3-202ENST00000561749 ZNF98A6NK75 572 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 HYPMO75409 117 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 ZNF688P0C7X2 276 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 FGF7P21781 194 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 AP2S1P53680 142 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-202ENST00000561749 DEFB131AP59861 70 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 RAP2BP61225 183 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 UHRF2Q96PU4 802 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 FAM110AQ9BQ89 295 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 GGTLC1Q9BX51 225 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 SLC25A32Q9H2D1 315 aa17.35■□□□□ 0.37
SMPD3-202ENST00000561749 CMC4P56277 68 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-202ENST00000561749 PLP1P60201 277 aa17.34■□□□□ 0.37
SMPD3-202ENST00000561749 RAB31Q13636 194 aa17.34■□□□□ 0.37
SMPD3-202ENST00000561749 C1orf194Q5T5A4 169 aa17.34■□□□□ 0.37
SMPD3-202ENST00000561749 MIC13Q5XKP0 118 aa17.34■□□□□ 0.37
SMPD3-202ENST00000561749 SLC25A39Q9BZJ4 359 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-202ENST00000561749 NRN1Q9NPD7 142 aa17.34■□□□□ 0.37
SMPD3-202ENST00000561749 FBXL17Q9UF56 701 aa17.34■□□□□ 0.37
SMPD3-202ENST00000561749 LOC102724200A0A096LPH7 203 aaPredicted RBP17.33■□□□□ 0.36
SMPD3-202ENST00000561749 H3BRN7 92 aa17.33■□□□□ 0.36
SMPD3-202ENST00000561749 RPL35AP18077 110 aaKnown RBP17.33■□□□□ 0.36
SMPD3-202ENST00000561749 PATE2Q6UY27 113 aa17.33■□□□□ 0.36
SMPD3-202ENST00000561749 THAP6Q8TBB0 222 aa17.33■□□□□ 0.36
SMPD3-202ENST00000561749 HSPB11Q9Y547 144 aa17.33■□□□□ 0.36
SMPD3-202ENST00000561749 RPL12P30050 165 aaKnown RBP17.32■□□□□ 0.36
SMPD3-202ENST00000561749 TM2D3Q9BRN9 247 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 SHANK2-AS3Q9BTD1 123 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 SMIM3Q9BZL3 60 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 ARV1Q9H2C2 271 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 RETNQ9HD89 108 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 U3KQK5 164 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 AGRNO00468 2067 aa17.32■□□□□ 0.36
SMPD3-202ENST00000561749 GIPP09681 153 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-202ENST00000561749 LYL1P12980 280 aa17.31■□□□□ 0.36
SMPD3-202ENST00000561749 Q5BKY6 102 aa17.31■□□□□ 0.36
SMPD3-202ENST00000561749 ZMAT4Q9H898 229 aa17.31■□□□□ 0.36
SMPD3-202ENST00000561749 COL7A1Q02388 2944 aa17.31■□□□□ 0.36
SMPD3-202ENST00000561749 COX7A2P2O60397 106 aa17.3■□□□□ 0.36
SMPD3-202ENST00000561749 OPCMLQ14982 345 aa17.3■□□□□ 0.36
SMPD3-202ENST00000561749 PSMG4Q5JS54 123 aa17.3■□□□□ 0.36
SMPD3-202ENST00000561749 RCHY1Q96PM5 261 aa17.3■□□□□ 0.36
SMPD3-202ENST00000561749 S100A7P31151 101 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 GALR1P47211 349 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 PRR20EP86478 221 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 PRR20CP86479 221 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 PRR20DP86480 221 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 PRR20BP86481 221 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 PRR20AP86496 221 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 PXDC1Q5TGL8 231 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 RSG1Q9BU20 258 aa17.29■□□□□ 0.36
SMPD3-202ENST00000561749 KNCNA6PVL3 124 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 RPL29P47914 159 aaKnown RBP17.28■□□□□ 0.36
SMPD3-202ENST00000561749 B2MP61769 119 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 TMEM37Q8WXS4 190 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 ATP5SQ99766 215 aa17.28■□□□□ 0.36
SMPD3-202ENST00000561749 SPATA25Q9BR10 227 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms