RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NPVFQ9HCQ7 196 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 DOK5Q9P104 306 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 TRAV2A0A0B4J234 112 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 SSNA1O43805 119 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 PTTG1O95997 202 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 CD5P06127 495 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 ORM2P19652 201 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 DEFB1P60022 68 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 PAFAH1B2P68402 229 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 GRAMD2BQ96HH9 432 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 NARS2Q96I59 477 aaKnown RBP10.24□□□□□ -0.77
TPM1-230ENST00000561266 ZMAT4Q9H898 229 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 MGAT4CQ9UBM8 478 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 SLC45A2Q9UMX9 530 aa10.24□□□□□ -0.77
TPM1-230ENST00000561266 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 AGPAT2O15120 278 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 FABP1P07148 127 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 LINC00869P0C866 280 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 PLP1P60201 277 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 VWC2Q2TAL6 325 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 TEPPQ6URK8 271 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 BPIFCQ8NFQ6 507 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 OR1B1Q8NGR6 318 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 PPP1R1CQ8WVI7 109 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 SPATA25Q9BR10 227 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 OVOL2Q9BRP0 275 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 SCRT1Q9BWW7 348 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 SLC25A32Q9H2D1 315 aa10.23□□□□□ -0.77
TPM1-230ENST00000561266 HELTA6NFD8 242 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 ZNF98A6NK75 572 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 SOCS3O14543 225 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 SULT1A1P50225 295 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 OR11H7Q8NGC8 314 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 UHRF2Q96PU4 802 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 GGACTQ9BVM4 153 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
TPM1-230ENST00000561266 H3BRN7 92 aa10.21□□□□□ -0.77
TPM1-230ENST00000561266 MPC2O95563 127 aa10.21□□□□□ -0.77
TPM1-230ENST00000561266 GIG44P09565 113 aaPredicted RBP10.21□□□□□ -0.77
TPM1-230ENST00000561266 PVALBP20472 110 aaPredicted RBP10.21□□□□□ -0.77
TPM1-230ENST00000561266 EWSR1Q01844 656 aaKnown RBP eCLIP10.21□□□□□ -0.77
TPM1-230ENST00000561266 FCN2Q15485 313 aa10.21□□□□□ -0.77
TPM1-230ENST00000561266 MORN5Q5VZ52 161 aa10.21□□□□□ -0.77
TPM1-230ENST00000561266 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
TPM1-230ENST00000561266 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
TPM1-230ENST00000561266 NRN1Q9NPD7 142 aa10.21□□□□□ -0.77
TPM1-230ENST00000561266 UBE2L5PA0A1B0GUS4 154 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 CFDP00746 253 aaPredicted RBP10.2□□□□□ -0.78
TPM1-230ENST00000561266 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
TPM1-230ENST00000561266 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 PSMG4Q5JS54 123 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 C1orf194Q5T5A4 169 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 MIC13Q5XKP0 118 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 OR8I2Q8N0Y5 310 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 TMEM37Q8WXS4 190 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 PPP1R14BQ96C90 147 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 C20orf173Q96LM9 149 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 TMEM147Q9BVK8 224 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 UQCC1Q9NVA1 299 aa10.2□□□□□ -0.78
TPM1-230ENST00000561266 E5RGE8 158 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 HYPMO75409 117 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 OR5G3P0C626 314 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 S100A11P31949 105 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
TPM1-230ENST00000561266 SELENOTP62341 195 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 PRR20EP86478 221 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 PRR20CP86479 221 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 PRR20DP86480 221 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 PRR20BP86481 221 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 PRR20AP86496 221 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 CYCSP99999 105 aaKnown RBP10.19□□□□□ -0.78
TPM1-230ENST00000561266 Q5BKY6 102 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 GDF5OSQ5U4N7 250 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 HIGD1AQ9Y241 93 aa10.19□□□□□ -0.78
TPM1-230ENST00000561266 KIR2DL5BA0A0G2JN68 375 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 KIR2DL5BA0A0G2JPC4 375 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
TPM1-230ENST00000561266 PRB4P10163 310 aaPredicted RBP10.18□□□□□ -0.78
TPM1-230ENST00000561266 CAMLGP49069 296 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 OXA1LQ15070 435 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 ACTL10Q5JWF8 245 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 TRPT1Q86TN4 253 aaKnown RBP10.18□□□□□ -0.78
TPM1-230ENST00000561266 KIR2DL5AQ8N109 375 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 OR5C1Q8NGR4 320 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 KIR2DL5BQ8NHK3 375 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 ARV1Q9H2C2 271 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
TPM1-230ENST00000561266 TRAV8-2A0A0B4J237 113 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 TRAV5A0A0B4J249 113 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 RLN2P04090 185 aa10.17□□□□□ -0.78
TPM1-230ENST00000561266 SNRPCP09234 159 aaKnown RBP10.17□□□□□ -0.78
TPM1-230ENST00000561266 C4BPBP20851 252 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms