RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 IGHV3-11P01762 117 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 ZNF343Q6P1L6 599 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 FXYD5Q96DB9 178 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 RNF125Q96EQ8 232 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 LINC00479Q96M42 142 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 CCDC140Q96MF4 163 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 PITPNC1Q9UKF7 332 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 RPH3ALQ9UNE2 315 aa8.46□□□□□ -1.05
SNRPA1-211ENST00000560433 IGHV3OR16-13A0A075B7E8 117 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 TRBV9A0A0B4J1U6 114 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 IGHV3-74A0A0B4J1X5 117 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 TRGV3P03979 118 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 C17orf77Q96MU5 243 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 TMEM167BQ9NRX6 74 aa8.46□□□□□ -1.06
SNRPA1-211ENST00000560433 PDE6DO43924 150 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 TOMM40O96008 361 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 TRBV12-3P01733 135 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 IGHG2P01859 326 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 RPL23P62829 140 aaKnown RBP8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 GNG5P63218 68 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 TMEM241Q24JQ0 296 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 FAM24BQ8N5W8 94 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 MRPL27Q9P0M9 148 aaKnown RBP8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 IGHV3-49A0A0A0MS15 119 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 IGHV3-66A0A0C4DH42 116 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 ZNF207O43670 478 aaKnown RBP8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 FSHBP01225 129 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 TPPP2P59282 170 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 ZNF502Q8TBZ5 544 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 SMR3AQ99954 134 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 ELOVL1Q9BW60 279 aa8.45□□□□□ -1.06
SNRPA1-211ENST00000560433 PF4V1P10720 104 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 PLP1P60201 277 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 RPL15P61313 204 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 RNF212Q495C1 297 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 HIST2H2BDQ6DRA6 164 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 ZNF600Q6ZNG1 722 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 NECAP1Q8NC96 275 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 Q8WTZ3 238 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 RNF2Q99496 336 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 NAT8Q9UHE5 227 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 SELENOKQ9Y6D0 94 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 TRAV34A0A0B4J273 112 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 NBEAP1P0C6P0 100 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 GP9P14770 177 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 PPIFP30405 207 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 RPL35P42766 123 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 RHEBQ15382 184 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 C19orf54Q5BKX5 351 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 Q6YL49 198 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 ZNF414Q96IQ9 312 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 SMCO4Q9NRQ5 59 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 OTOGQ6ZRI0 2925 aa8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 SETD2Q9BYW2 2564 aaPredicted RBP8.44□□□□□ -1.06
SNRPA1-211ENST00000560433 TRAV30A0A087WSZ9 112 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 WI2-2373I1.2A0A1W2PRP0 233 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 OR2C1O95371 312 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 IGF1P05019 195 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 HIST1H1BP16401 226 aaKnown RBP8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 ATF4P18848 351 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 YPEL3P61236 119 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 ATP5G2Q06055 141 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 SIGLECL1Q8N7X8 197 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 ZNF586Q9NXT0 402 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 PGPA6NDG6 321 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 ZNF98A6NK75 572 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 COLCA2A8K830 154 aa8.43□□□□□ -1.06
SNRPA1-211ENST00000560433 F6UZH7 168 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 OR5I1Q13606 314 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 TOMM20LQ6UXN7 152 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 OCC1Q8TAD7 63 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 VN1R17PQ8TDU5 208 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 TMEM68Q96MH6 324 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 ASCL2Q99929 193 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 VPREB3Q9UKI3 123 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 BAHCC1Q9P281 2608 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 A0A1W2PRE2 83 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 H3BRN7 92 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 M0QZK8 103 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 AP4M1O00189 453 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 SLC17A3O00476 420 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 FABP1P07148 127 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
SNRPA1-211ENST00000560433 HELTA6NFD8 242 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 K7EN84 100 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 YAE1D1Q9NRH1 226 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
SNRPA1-211ENST00000560433 TGOLN2O43493 480 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms