RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ETFRF1Q6IPR1 90 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 TEPPQ6URK8 271 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
SMAD3-214ENST00000560402 MBD3L1Q8WWY6 194 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 CACNG8Q8WXS5 425 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 SLC35E1Q96K37 410 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 SRSF8Q9BRL6 282 aaKnown RBP10.26□□□□□ -0.77
SMAD3-214ENST00000560402 BIRC6Q9NR09 4857 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 MAP1LC3B2A6NCE7 125 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 IZUMO1RA6ND01 250 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 GGCTO75223 188 aaKnown RBP10.25□□□□□ -0.77
SMAD3-214ENST00000560402 SNAPINO95295 136 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 CD5P06127 495 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 M6PRP20645 277 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 GPX4P36969 197 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-214ENST00000560402 PPT1P50897 306 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 CD81P60033 236 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 C10orf55Q5SWW7 151 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 LINC00322Q6ZN03 302 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-214ENST00000560402 OR10G4Q8NGN3 311 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 OR10G9Q8NGN4 311 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 MAP1LC3BQ9GZQ8 125 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 RPRMQ9NS64 109 aa10.25□□□□□ -0.77
SMAD3-214ENST00000560402 TECRQ9NZ01 308 aaKnown RBP10.25□□□□□ -0.77
SMAD3-214ENST00000560402 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
SMAD3-214ENST00000560402 A0A1W2PPV4 95 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 TEX22C9J3V5 150 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 LGALS9O00182 355 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 OR2J3O76001 311 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 SFTA3P0C7M3 94 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 RNASE2P10153 161 aaKnown RBP10.24□□□□□ -0.77
SMAD3-214ENST00000560402 C15orf32Q32M92 178 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 CD300EQ496F6 205 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-214ENST00000560402 TMEM231Q9H6L2 316 aa10.24□□□□□ -0.77
SMAD3-214ENST00000560402 EPPK1P58107 5090 aaKnown RBP10.24□□□□□ -0.77
SMAD3-214ENST00000560402 A0A1B0GV50 99 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 C2orf70A6NJV1 201 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 PRSS46E5RG02 174 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 MT-CO2P00403 227 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 HIST1H1BP16401 226 aaKnown RBP10.23□□□□□ -0.77
SMAD3-214ENST00000560402 CDC34P49427 236 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-214ENST00000560402 KLK9Q2XQG4 91 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 BSXQ3C1V8 233 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 KHDC3LQ587J8 217 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 OR1L6Q8NGR2 347 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 SLC35B3Q9H1N7 401 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 KLK9Q9UKQ9 250 aa10.23□□□□□ -0.77
SMAD3-214ENST00000560402 A8MWP6 167 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 CRYGCP07315 174 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 OR13C7P0DN81 318 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 DEFB114Q30KQ6 69 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 C10orf91Q5T1B1 145 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 FAM122CQ6P4D5 195 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 SPSB3Q6PJ21 355 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 LCN15Q6UWW0 184 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 ADAMTSL5Q6ZMM2 481 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 SLC16A13Q7RTY0 426 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 TMEM144Q7Z5S9 345 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 ZNF114Q8NC26 417 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 EEF1AKMT3Q96AZ1 226 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 GGTLC1Q9BX51 225 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 SRD5A3Q9H8P0 318 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 MANBALQ9NQG1 85 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 FBXL7Q9UJT9 491 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 DMRT1Q9Y5R6 373 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 PXMP4Q9Y6I8 212 aa10.22□□□□□ -0.77
SMAD3-214ENST00000560402 ZNF785A8K8V0 405 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 PPP5D1E7EU14 171 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 CD7P09564 240 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 FOLR2P14207 255 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 MYOD1P15172 320 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 ARL3P36405 182 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 RPL29P47914 159 aaKnown RBP10.21□□□□□ -0.77
SMAD3-214ENST00000560402 PSMB3P49720 205 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 B2MP61769 119 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 RHOBP62745 196 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 PMS2P11Q13670 270 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 OR10W1Q8NGF6 305 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 RNF2Q99496 336 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-214ENST00000560402 GNG13Q9P2W3 67 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 RFNGQ9Y644 331 aa10.21□□□□□ -0.77
SMAD3-214ENST00000560402 HYDINQ4G0P3 5121 aa10.21□□□□□ -0.78
SMAD3-214ENST00000560402 PLECQ15149 4684 aaKnown RBP10.2□□□□□ -0.78
SMAD3-214ENST00000560402 OR11H12B2RN74 326 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 BCL2P10415 239 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 CTRB1P17538 263 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 GUCA2BQ16661 112 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 FAM106AQ4KMX7 169 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 SOHLH1Q5JUK2 328 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 CTRB2Q6GPI1 263 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 ALMS1Q8TCU4 4167 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 TMEM170AQ8WVE7 144 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 CCDC140Q96MF4 163 aa10.2□□□□□ -0.78
SMAD3-214ENST00000560402 FANCD2OSQ96PS1 177 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms