RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 GUCA2BQ16661 112 aa9.09□□□□□ -0.95
RABGGTA-215ENST00000560207 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
RABGGTA-215ENST00000560207 TCF24Q7RTU0 167 aa9.09□□□□□ -0.95
RABGGTA-215ENST00000560207 TMEM61Q8N0U2 210 aa9.09□□□□□ -0.95
RABGGTA-215ENST00000560207 AURKAIP1Q9NWT8 199 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-215ENST00000560207 HIGD1AQ9Y241 93 aa9.09□□□□□ -0.95
RABGGTA-215ENST00000560207 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 UBE2L5PA0A1B0GUS4 154 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 ZNF785A8K8V0 405 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 HMSDA8MTL9 139 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 ZNF207O43670 478 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 ORM2P19652 201 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 FGF7P21781 194 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 OR2F1Q13607 317 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 FAM90A2PQ658T7 463 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 GATAD1Q8WUU5 269 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 ST8SIA2Q92186 375 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 RNF2Q99496 336 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 TNFSF18Q9UNG2 199 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
RABGGTA-215ENST00000560207 A8MZ25 164 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 DNASE2O00115 360 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 RPL7P18124 248 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 GALR1P47211 349 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 RPL11P62913 178 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 PRR20EP86478 221 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 PRR20CP86479 221 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 PRR20DP86480 221 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 PRR20BP86481 221 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 PRR20AP86496 221 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 ZNF345Q14585 488 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 CLINT1Q14677 625 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 OPCMLQ14982 345 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 SIGLEC15Q6ZMC9 328 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 OR8I2Q8N0Y5 310 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 MGST2Q99735 147 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 GGTLC1Q9BX51 225 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 NPCDR1Q9BY65 106 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 WDR61Q9GZS3 305 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 ARL6Q9H0F7 186 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 DNAJC4Q9NNZ3 241 aa9.07□□□□□ -0.96
RABGGTA-215ENST00000560207 FXYD6-FXYD2A0A087WZ82 144 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 BORCS7-ASMTA0A0B4J1R7 106 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 ZNF98A6NK75 572 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 COX7A2P2O60397 106 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 OR5G3P0C626 314 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 B2MP61769 119 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 C10orf113Q5VZT2 155 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 SHANK2-AS3Q9BTD1 123 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 ARV1Q9H2C2 271 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 NRN1Q9NPD7 142 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 TIMM9Q9Y5J7 89 aa9.06□□□□□ -0.96
RABGGTA-215ENST00000560207 A0A0D9SG52 128 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 IZUMO1RA6ND01 250 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 JTBO76095 146 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 ID1P41134 155 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 CD81P60033 236 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 SNRPD3P62318 126 aaKnown RBP9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 TCTE3Q8IZS6 198 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 PRR25Q96S07 402 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 SLC25A39Q9BZJ4 359 aaPredicted RBP9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 CLEC5AQ9NY25 188 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
RABGGTA-215ENST00000560207 IGHV3-49A0A0A0MS15 119 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 OR11H12B2RN74 326 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 H3BRN7 92 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 MBP02144 154 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 APOHP02749 345 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 EDN2P20800 178 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 GATA2P23769 480 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 EIF5AP63241 154 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 SERF2P84101 59 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 DEFB121Q5J5C9 76 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 LINC00305Q7Z4B0 112 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 BPIFA4PQ86YQ2 179 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 GNPNAT1Q96EK6 184 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 MFFQ9GZY8 342 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
RABGGTA-215ENST00000560207 IGHV3OR16-13A0A075B7E8 117 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 IGHV3-74A0A0B4J1X5 117 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 K7EIL1 84 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 K7EQG2 157 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 ARPC5O15511 151 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 CXCL2P19875 107 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 C4BPBP20851 252 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 GUK1Q16774 197 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 Q5BKY6 102 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 MIC13Q5XKP0 118 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 TMEM182Q6ZP80 229 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 AKAP14Q86UN6 197 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 Q8N1Y9 231 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 HYLS1Q96M11 299 aa9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 MRPL32Q9BYC8 188 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-215ENST00000560207 TUBA4BQ9H853 241 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms