RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 BAXQ07812 192 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 ATP6V1FQ16864 119 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 C1orf194Q5T5A4 169 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 LINC00322Q6ZN03 302 aaPredicted RBP12.53□□□□□ -0.4
RPL28-209ENST00000560055 GBGT1Q8N5D6 347 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 PFDN2Q9UHV9 154 aa12.53□□□□□ -0.4
RPL28-209ENST00000560055 HELTA6NFD8 242 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 TFPI2P48307 235 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 ZNF546Q86UE3 836 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 ASB13Q8WXK3 278 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 TUBA4BQ9H853 241 aa12.52□□□□□ -0.41
RPL28-209ENST00000560055 UBE2L5PA0A1B0GUS4 154 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
RPL28-209ENST00000560055 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
RPL28-209ENST00000560055 GIPP09681 153 aaPredicted RBP12.51□□□□□ -0.41
RPL28-209ENST00000560055 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
RPL28-209ENST00000560055 ORM2P19652 201 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
RPL28-209ENST00000560055 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
RPL28-209ENST00000560055 SIGLEC15Q6ZMC9 328 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 SBSPONQ8IVN8 264 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 CITED4Q96RK1 184 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 UBQLN2Q9UHD9 624 aa12.51□□□□□ -0.41
RPL28-209ENST00000560055 DNAH7Q8WXX0 4024 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 K7EQG2 157 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 DNASE2O00115 360 aaPredicted RBP12.5□□□□□ -0.41
RPL28-209ENST00000560055 CAMLGP49069 296 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 STXBP6Q8NFX7 210 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 DOK5Q9P104 306 aa12.5□□□□□ -0.41
RPL28-209ENST00000560055 ZNF98A6NK75 572 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 H3BRN7 92 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 HYPMO75409 117 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 NHLRC4P0CG21 123 aaPredicted RBP12.49□□□□□ -0.41
RPL28-209ENST00000560055 RPL12P30050 165 aaKnown RBP12.49□□□□□ -0.41
RPL28-209ENST00000560055 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
RPL28-209ENST00000560055 PRR20EP86478 221 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 PRR20CP86479 221 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 PRR20DP86480 221 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 PRR20BP86481 221 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 PRR20AP86496 221 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 RAB31Q13636 194 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 PATE2Q6UY27 113 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 WFDC3Q8IUB2 231 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 THAP6Q8TBB0 222 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 ASCL2Q99929 193 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 SLC25A39Q9BZJ4 359 aaPredicted RBP12.49□□□□□ -0.41
RPL28-209ENST00000560055 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 FBXL17Q9UF56 701 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
RPL28-209ENST00000560055 MPDU1O75352 247 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 FGF7P21781 194 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 RAP2BP61225 183 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 CLINT1Q14677 625 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 OPCMLQ14982 345 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 Q5BKY6 102 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 PPP1R14BQ96C90 147 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 SHANK2-AS3Q9BTD1 123 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
RPL28-209ENST00000560055 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 S100A7P31151 101 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
RPL28-209ENST00000560055 FGL1Q08830 312 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 HAGHQ16775 308 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 OR8I2Q8N0Y5 310 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 NPCDR1Q9BY65 106 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 SLC25A32Q9H2D1 315 aa12.47□□□□□ -0.41
RPL28-209ENST00000560055 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
RPL28-209ENST00000560055 G3V3Q6 166 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 OR5G3P0C626 314 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 ZNF124Q15973 351 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 LEMD1Q68G75 181 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 C17orf77Q96MU5 243 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 ATP5SQ99766 215 aa12.46□□□□□ -0.41
RPL28-209ENST00000560055 WDR61Q9GZS3 305 aaKnown RBP12.46□□□□□ -0.41
RPL28-209ENST00000560055 STAB2Q8WWQ8 2551 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 SOCS3O14543 225 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 DEFB131AP59861 70 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 B2MP61769 119 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 GPR82Q96P67 336 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 SLC25A22Q9H936 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms