RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 TMEM37Q8WXS4 190 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 TMEM190Q8WZ59 177 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 UHRF2Q96PU4 802 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 METTL26Q96S19 204 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 ZNF747Q9BV97 191 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 SLC25A22Q9H936 323 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 DNAJC4Q9NNZ3 241 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 RPRMQ9NS64 109 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 UBQLN2Q9UHD9 624 aa7.99□□□□□ -1.13
TPM1-221ENST00000559831 ELOA3CA0A087WX78 387 aaPredicted RBP7.98□□□□□ -1.13
TPM1-221ENST00000559831 IGHV3-49A0A0A0MS15 119 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 A0A1W2PPV4 95 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 HMGB3O15347 200 aaKnown RBP7.98□□□□□ -1.13
TPM1-221ENST00000559831 PF4P02776 101 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
TPM1-221ENST00000559831 FHITP49789 147 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 RHOBP62745 196 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 TM4SF20Q53R12 229 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 SPATA31B1PQ5VZV4 182 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 LINC00305Q7Z4B0 112 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 REC114Q7Z4M0 266 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 GATAD1Q8WUU5 269 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 RNF2Q99496 336 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 ACTR3CQ9C0K3 210 aaPredicted RBP7.98□□□□□ -1.13
TPM1-221ENST00000559831 UFC1Q9Y3C8 167 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 ATRQ13535 2644 aa7.98□□□□□ -1.13
TPM1-221ENST00000559831 IGHV3OR16-13A0A075B7E8 117 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 IGHV3-74A0A0B4J1X5 117 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 IGHV3-66A0A0C4DH42 116 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 NPPCP23582 126 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 MYCNOSP40205 109 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 RAB5CP51148 216 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 FHL3Q13643 280 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 KLF5Q13887 457 aaPredicted RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 MORN5Q5VZ52 161 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 LEMD1Q68G75 181 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 MIR17HGQ75NE6 70 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 SSX7Q7RTT5 188 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 RPP25LQ8N5L8 163 aaKnown RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 PCNPQ8WW12 178 aaKnown RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 DLX4Q92988 240 aaPredicted RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 NARS2Q96I59 477 aaKnown RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 SCRT1Q9BWW7 348 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 MRPL32Q9BYC8 188 aaKnown RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 SLC25A39Q9BZJ4 359 aaPredicted RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 SEPSECSQ9HD40 501 aaKnown RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 MRPL27Q9P0M9 148 aaKnown RBP7.97□□□□□ -1.13
TPM1-221ENST00000559831 FUT9Q9Y231 359 aa7.97□□□□□ -1.13
TPM1-221ENST00000559831 TRAV5A0A0B4J249 113 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 CTXND1A0A1B0GTU2 59 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 A0A1B0GV50 99 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 H3BRN7 92 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 LGALS9O00182 355 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 APOHP02749 345 aaPredicted RBP7.96□□□□□ -1.14
TPM1-221ENST00000559831 EDN2P20800 178 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 S100A7P31151 101 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 ZNF726P1Q15940 193 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 SHISA2Q6UWI4 295 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 LCN15Q6UWW0 184 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 DPPA3Q6W0C5 159 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 ZNF767PQ75MW2 155 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 S100A7AQ86SG5 101 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 IQCF2Q8IXL9 164 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 OR4F17Q8NGA8 305 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 RAB24Q969Q5 203 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 OR4F4Q96R69 305 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 SHANK2-AS3Q9BTD1 123 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 DAZ1Q9NQZ3 744 aaKnown RBP7.96□□□□□ -1.14
TPM1-221ENST00000559831 PEMTQ9UBM1 199 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 SELENOKQ9Y6D0 94 aa7.96□□□□□ -1.14
TPM1-221ENST00000559831 IGHV7-4-1A0A0J9YVY3 117 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 TMEM213A2RRL7 107 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 MAP1LC3B2A6NCE7 125 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 ZNF98A6NK75 572 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 A8MWP6 167 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 SEC14L6B5MCN3 397 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 K7EMT4 169 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 OVOL1O14753 267 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 C8orf88P0DMB2 117 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 CRYBB3P26998 211 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 FGF8P55075 233 aaPredicted RBP7.95□□□□□ -1.14
TPM1-221ENST00000559831 TAS2R45P59539 299 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 SLC25A2Q9BXI2 301 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 MAP1LC3BQ9GZQ8 125 aa7.95□□□□□ -1.14
TPM1-221ENST00000559831 TECRQ9NZ01 308 aaKnown RBP7.95□□□□□ -1.14
TPM1-221ENST00000559831 A0A1W2PS18 150 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 C2orf70A6NJV1 201 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 OR7C2O60412 319 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 H2AFB1P0C5Y9 115 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 RAB14P61106 215 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 BLOC1S1P78537 153 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 KHDC3LQ587J8 217 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 OR8I2Q8N0Y5 310 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 LRRC20Q8TCA0 184 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 SFT2D1Q8WV19 159 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms