RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 SRPXP78539 464 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 C1orf194Q5T5A4 169 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 AMTNQ6UX39 209 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 TMEM182Q6ZP80 229 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 OR1S1Q8NH92 325 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 SLC35E1Q96K37 410 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 DUXBA0A1W2PPF3 345 aa13.37□□□□□ -0.27
CDC42BPB-206ENST00000559790 FABP12A6NFH5 140 aa13.37□□□□□ -0.27
CDC42BPB-206ENST00000559790 NUP62P37198 522 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-206ENST00000559790 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-206ENST00000559790 SCGB3A2Q96PL1 93 aa13.37□□□□□ -0.27
CDC42BPB-206ENST00000559790 A0A0J9YX75 114 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 SLC25A6P12236 298 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 PPP1R1AQ13522 171 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 TMED4Q7Z7H5 227 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 MCFD2Q8NI22 146 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 PLA2G2EQ9NZK7 142 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 DKK2Q9UBU2 259 aa13.36□□□□□ -0.27
CDC42BPB-206ENST00000559790 ISLRO14498 428 aa13.35□□□□□ -0.27
CDC42BPB-206ENST00000559790 FAM78BQ5VT40 261 aa13.35□□□□□ -0.27
CDC42BPB-206ENST00000559790 LINC00052Q96N35 136 aa13.35□□□□□ -0.27
CDC42BPB-206ENST00000559790 GATA2P23769 480 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-206ENST00000559790 FAM222AQ5U5X8 452 aa13.34□□□□□ -0.27
CDC42BPB-206ENST00000559790 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.34□□□□□ -0.27
CDC42BPB-206ENST00000559790 MAGT1Q9H0U3 335 aa13.34□□□□□ -0.27
CDC42BPB-206ENST00000559790 RYR1P21817 5038 aa13.34□□□□□ -0.27
CDC42BPB-206ENST00000559790 SMIM9A6NGZ8 99 aa13.33□□□□□ -0.28
CDC42BPB-206ENST00000559790 SFT2D2O95562 160 aa13.33□□□□□ -0.28
CDC42BPB-206ENST00000559790 ANXA3P12429 323 aa13.33□□□□□ -0.28
CDC42BPB-206ENST00000559790 NDUFAF3Q9BU61 184 aa13.33□□□□□ -0.28
CDC42BPB-206ENST00000559790 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
CDC42BPB-206ENST00000559790 IGHV3OR16-12A0A075B7B8 117 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 TRAV8-2A0A0B4J237 113 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 SNRPGP15A8MWD9 76 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 VAMP1P23763 118 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 EMP1P54849 157 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 Q6ZR54 194 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 LINC00336Q6ZUF6 198 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 CCDC190Q86UF4 302 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 OR4B1Q8NGF8 309 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 COQ8AQ8NI60 647 aa13.32□□□□□ -0.28
CDC42BPB-206ENST00000559790 TMEM189A5PLL7 270 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 PMS2P5A8MQ11 134 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 H3BP45 60 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 SYNGR2O43760 224 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 P0DMU3 169 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 FAM231AP0DMU4 169 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 FAM231CP0DMU5 169 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 PSG9Q00887 426 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 GGNBP1Q5YKI7 109 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 ACOT7LQ6ZUV0 252 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 RBM38Q9H0Z9 239 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 SLC45A2Q9UMX9 530 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 ABCA13Q86UQ4 5058 aa13.31□□□□□ -0.28
CDC42BPB-206ENST00000559790 WRBO00258 174 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 CCNKO75909 580 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 PRM2P04554 102 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 ID1P41134 155 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 SPATA31B1PQ5VZV4 182 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 TOMM5Q8N4H5 51 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 TMED3Q9Y3Q3 217 aa13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 YTHDF2Q9Y5A9 579 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-206ENST00000559790 LOC102723971A0A1B0GUV8 181 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 PLAC8L1A1L4L8 177 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 H3BRN7 92 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 M0R2N4 97 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 ADAP1O75689 374 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 FABP1P07148 127 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 HOXB5P09067 269 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 FAUP35544 74 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 RAB11AP62491 216 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 OXA1LQ15070 435 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 PYDC2Q56P42 97 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 IGFL4Q6B9Z1 124 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 SLC25A21Q9BQT8 299 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 NIPSNAP3BQ9BS92 247 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 SLC25A22Q9H936 323 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 DOK5Q9P104 306 aa13.29□□□□□ -0.28
CDC42BPB-206ENST00000559790 MEOX2P50222 304 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 LGALS9BQ3B8N2 356 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 OR11H7Q8NGC8 314 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 RSG1Q9BU20 258 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 SRRQ9GZT4 340 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 PFDN2Q9UHV9 154 aa13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 PAIP2BQ9ULR5 123 aaKnown RBP13.28□□□□□ -0.28
CDC42BPB-206ENST00000559790 MED6O75586 246 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 AP3S2P59780 193 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 ID3Q02535 119 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 SPANXN5Q5MJ07 72 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 CENPSQ8N2Z9 138 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 OR4D5Q8NGN0 318 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 DEDD2Q8WXF8 326 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms