RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 WFDC3Q8IUB2 231 aa15.14■□□□□ 0.01
TSPAN3-207ENST00000559494 OR5C1Q8NGR4 320 aa15.14■□□□□ 0.01
TSPAN3-207ENST00000559494 OR4C46A6NHA9 309 aa15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 LINC00869P0C866 280 aa15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 RPL12P30050 165 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 BAXQ07812 192 aa15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 OR1B1Q8NGR6 318 aa15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 THAP6Q8TBB0 222 aa15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 B9D2Q9BPU9 175 aa15.13■□□□□ 0.01
TSPAN3-207ENST00000559494 UBE2L5PA0A1B0GUS4 154 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 FRMD6-AS1P0C7T7 363 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 RAP2BP61225 183 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 PAFAH1B2P68402 229 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 PATE2Q6UY27 113 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 DOK5Q9P104 306 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 UBQLN2Q9UHD9 624 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 PFDN2Q9UHV9 154 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 HSPB11Q9Y547 144 aa15.12■□□□□ 0.01
TSPAN3-207ENST00000559494 hCG_2014768A0A024R1R8 64 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 DNASE2O00115 360 aaPredicted RBP15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 HYPMO75409 117 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 CAMLGP49069 296 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 CLINT1Q14677 625 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 ODF3L2Q3SX64 289 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 ZNF546Q86UE3 836 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 ASB13Q8WXK3 278 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 PPP1R14BQ96C90 147 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 GGTLC1Q9BX51 225 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 TUBA4BQ9H853 241 aa15.11■□□□□ 0.01
TSPAN3-207ENST00000559494 TRAV2A0A0B4J234 112 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 HELTA6NFD8 242 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 ZNF98A6NK75 572 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 FGF7P21781 194 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 NUP62P37198 522 aaPredicted RBP15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 RAB31Q13636 194 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 C1orf194Q5T5A4 169 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 SIGLEC15Q6ZMC9 328 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 STXBP6Q8NFX7 210 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 ASCL2Q99929 193 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 ARL6Q9H0F7 186 aa15.1■□□□□ 0.01
TSPAN3-207ENST00000559494 A0A1B0GVG6 124 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 G3V3Q6 166 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 K7EQG2 157 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 AP2S1P53680 142 aaPredicted RBP15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 PRR20EP86478 221 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 PRR20CP86479 221 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 PRR20DP86480 221 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 PRR20BP86481 221 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 PRR20AP86496 221 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 MIC13Q5XKP0 118 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 FAM24BQ8N5W8 94 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 OR2T35Q8NGX2 323 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 DCANP1Q8TF63 244 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 CITED4Q96RK1 184 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 SRD5A3Q9H8P0 318 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 HIGD1AQ9Y241 93 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 COL7A1Q02388 2944 aa15.09■□□□□ 0.01
TSPAN3-207ENST00000559494 RBMY1BA6NDE4 496 aaKnown RBP15.08■□□□□ 0
TSPAN3-207ENST00000559494 RBMY1EA6NEQ0 496 aaKnown RBP15.08■□□□□ 0
TSPAN3-207ENST00000559494 SMLR1H3BR10 107 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 OR5G3P0C626 314 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 RBMY1DP0C7P1 496 aaKnown RBP15.08■□□□□ 0
TSPAN3-207ENST00000559494 FGL1Q08830 312 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 OPCMLQ14982 345 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 LINC00322Q6ZN03 302 aaPredicted RBP15.08■□□□□ 0
TSPAN3-207ENST00000559494 SBSPONQ8IVN8 264 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 OR8I2Q8N0Y5 310 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 FAM110AQ9BQ89 295 aa15.08■□□□□ 0
TSPAN3-207ENST00000559494 SLC25A39Q9BZJ4 359 aaPredicted RBP15.08■□□□□ 0
TSPAN3-207ENST00000559494 HUWE1Q7Z6Z7 4374 aaKnown RBP15.07■□□□□ 0
TSPAN3-207ENST00000559494 H3BRN7 92 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 RPL29P47914 159 aaKnown RBP15.07■□□□□ 0
TSPAN3-207ENST00000559494 PXDC1Q5TGL8 231 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 LEMD1Q68G75 181 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 TMEM37Q8WXS4 190 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 UHRF2Q96PU4 802 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 SHANK2-AS3Q9BTD1 123 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 SCRT1Q9BWW7 348 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 SMIM3Q9BZL3 60 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 WFDC1Q9HC57 220 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 FBXL17Q9UF56 701 aa15.07■□□□□ 0
TSPAN3-207ENST00000559494 MPDU1O75352 247 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 CMC4P56277 68 aaPredicted RBP15.06■□□□□ 0
TSPAN3-207ENST00000559494 APRG1Q8IVJ8 170 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 ATP5SQ99766 215 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 NPCDR1Q9BY65 106 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 WDR61Q9GZS3 305 aaKnown RBP15.06■□□□□ 0
TSPAN3-207ENST00000559494 ARV1Q9H2C2 271 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 SLC25A32Q9H2D1 315 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 SLC25A22Q9H936 323 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 MAP6D1Q9H9H5 199 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 NRN1Q9NPD7 142 aa15.06■□□□□ 0
TSPAN3-207ENST00000559494 S100A7P31151 101 aa15.05■□□□□ -0
TSPAN3-207ENST00000559494 ZNF124Q15973 351 aa15.05■□□□□ -0
TSPAN3-207ENST00000559494 C17orf77Q96MU5 243 aa15.05■□□□□ -0
TSPAN3-207ENST00000559494 SLC39A9Q9NUM3 307 aa15.05■□□□□ -0
TSPAN3-207ENST00000559494 AGRNO00468 2067 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 DEFB131AP59861 70 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 B2MP61769 119 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 Q6ZRG5 221 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms