RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CD28P10747 220 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 GCHFRP30047 84 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 SVBPQ8N300 66 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 FAM167A-AS1Q96KT0 104 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 TRGV3P03979 118 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 FABP1P07148 127 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 C8orf88P0DMB2 117 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 PSG1P11464 419 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 TPPP2P59282 170 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 CD81P60033 236 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 DEFA5Q01523 94 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
TPM1-219ENST00000559397 C10orf113Q5VZT2 155 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 TXN2Q99757 166 aa12.8□□□□□ -0.36
TPM1-219ENST00000559397 TENM1Q9UKZ4 2725 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 PAGE4O60829 102 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 TAS2R45P59539 299 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
TPM1-219ENST00000559397 RHOGP84095 191 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 SOHLH1Q5JUK2 328 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 HIST2H2BDQ6DRA6 164 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 ATRAIDQ6UW56 229 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 PQLC2Q6ZP29 291 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 C11orf44Q8N8P7 122 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 NECAP1Q8NC96 275 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 SUN5Q8TC36 379 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 DOK5Q9P104 306 aa12.79□□□□□ -0.36
TPM1-219ENST00000559397 HYPMO75409 117 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 SCO1O75880 301 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 TOMM40O96008 361 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 MORN5Q5VZ52 161 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 ZNF491Q8N8L2 437 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 S4R3C0 116 aa12.78□□□□□ -0.36
TPM1-219ENST00000559397 FAM223BA6NKX1 122 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 GNG7O60262 68 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 SLC25A2Q9BXI2 301 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 TMEM167BQ9NRX6 74 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.36
TPM1-219ENST00000559397 CMYA5Q8N3K9 4069 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 TMEM250H0YL14 139 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 ORM2P19652 201 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 FAM90A2PQ658T7 463 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 USMG5Q96IX5 58 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 MDFIQ99750 246 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
TPM1-219ENST00000559397 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
TPM1-219ENST00000559397 COL6A5A8TX70 2615 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 TRAV5A0A0B4J249 113 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 SNAPINO95295 136 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 Q56UQ5 140 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 UBE2E2Q96LR5 201 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 UHRF2Q96PU4 802 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 CITED1Q99966 193 aa12.76□□□□□ -0.37
TPM1-219ENST00000559397 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
TPM1-219ENST00000559397 A0A0G2JLM5 398 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 WI2-2373I1.2A0A1W2PRP0 233 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 OR2C1O95371 312 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 CTSGP08311 255 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 CDX1P47902 265 aaPredicted RBP12.75□□□□□ -0.37
TPM1-219ENST00000559397 ATP5G2Q06055 141 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 ATP6V0BQ99437 205 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
TPM1-219ENST00000559397 GNB4Q9HAV0 340 aa12.75□□□□□ -0.37
TPM1-219ENST00000559397 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
TPM1-219ENST00000559397 FAM74A7A6NL05 159 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 OR7C2O60412 319 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 UBE2G2P60604 165 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 LYZP61626 148 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 C12orf54Q6X4T0 127 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 HIGD1AQ9Y241 93 aa12.74□□□□□ -0.37
TPM1-219ENST00000559397 YTHDF2Q9Y5A9 579 aaKnown RBP12.74□□□□□ -0.37
TPM1-219ENST00000559397 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 SCGB2A1O75556 95 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 IGHV3-11P01762 117 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 ADMP35318 185 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 ATP5G3P48201 142 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 Q8WTZ3 238 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 EEF1AKMT3Q96AZ1 226 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 ZNF414Q96IQ9 312 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 GAR1Q9NY12 217 aaKnown RBP12.73□□□□□ -0.37
TPM1-219ENST00000559397 TRRAPQ9Y4A5 3859 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms