RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RBMS2Q15434 407 aaKnown RBP7.26□□□□□ -1.25
SPG11-214ENST00000558989 SPSB3Q6PJ21 355 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 DEFB125Q8N687 156 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 DUSP18Q8NEJ0 188 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 ZNF680Q8NEM1 530 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 SLC25A21Q9BQT8 299 aaPredicted RBP7.26□□□□□ -1.25
SPG11-214ENST00000558989 NEURL2Q9BR09 285 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 ZNF436Q9C0F3 470 aaPredicted RBP7.26□□□□□ -1.25
SPG11-214ENST00000558989 RBKSQ9H477 322 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 FNDC4Q9H6D8 234 aaPredicted RBP7.26□□□□□ -1.25
SPG11-214ENST00000558989 SIGLEC8Q9NYZ4 499 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 PAIP2BQ9ULR5 123 aaKnown RBP7.26□□□□□ -1.25
SPG11-214ENST00000558989 A0A0B4J2A0 478 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 NDUFA4O00483 81 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 SFT2D2O95562 160 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 IFNA10P01566 189 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 IAPPP10997 89 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 PLP1P60201 277 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 CNPY1Q3B7I2 92 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 ANXA2RQ3ZCQ2 193 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 IL22RA2Q969J5 263 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 Q9H8V8 135 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 TECRQ9NZ01 308 aaKnown RBP7.25□□□□□ -1.25
SPG11-214ENST00000558989 SHPKQ9UHJ6 478 aa7.25□□□□□ -1.25
SPG11-214ENST00000558989 CENPXA8MT69 81 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 TFPI2P48307 235 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 SRPXP78539 464 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 NMSQ5H8A3 153 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 OR52E5Q8NH55 327 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 DTD1Q8TEA8 209 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 DAZ1Q9NQZ3 744 aaKnown RBP7.24□□□□□ -1.25
SPG11-214ENST00000558989 MRPL27Q9P0M9 148 aaKnown RBP7.24□□□□□ -1.25
SPG11-214ENST00000558989 U3KQK5 164 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 NAP1L6A6NFF2 107 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 OR11H12B2RN74 326 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 ADAP1O75689 374 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 NDUFB6O95139 128 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 NPY1RP25929 384 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 BTCP35070 178 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 UBE2MP61081 183 aaKnown RBP7.24□□□□□ -1.25
SPG11-214ENST00000558989 TNFRSF9Q07011 255 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 TIGITQ495A1 244 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 OR4D5Q8NGN0 318 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 OR2K2Q8NGT1 345 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 ZNF414Q96IQ9 312 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 C7orf50Q9BRJ6 194 aaKnown RBP7.24□□□□□ -1.25
SPG11-214ENST00000558989 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
SPG11-214ENST00000558989 HUWE1Q7Z6Z7 4374 aaKnown RBP7.24□□□□□ -1.25
SPG11-214ENST00000558989 TENM3Q9P273 2699 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 LOC105371267A0A1B0GV96 52 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 INS-IGF2F8WCM5 200 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 CORTO00230 105 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 TMEM50AO95807 157 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 RND2P52198 227 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 TOMM20LQ6UXN7 152 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 GBGT1Q8N5D6 347 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 ACY3Q96HD9 319 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 RNF2Q99496 336 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 RETNQ9HD89 108 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 AGRNO00468 2067 aa7.23□□□□□ -1.25
SPG11-214ENST00000558989 TRAV14DV4A0A0A6YYC5 116 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 A0A1B0GU03 582 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 C9orf170A2RU37 121 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 PLA2G10O15496 165 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 LYRM1O43325 122 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 APOHP02749 345 aaPredicted RBP7.22□□□□□ -1.25
SPG11-214ENST00000558989 IFNA4P05014 189 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 OR4E1P0C645 316 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 NHLRC4P0CG21 123 aaPredicted RBP7.22□□□□□ -1.25
SPG11-214ENST00000558989 C8orf88P0DMB2 117 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 CEBPGP53567 150 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 BSXQ3C1V8 233 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 C2orf83Q53S99 150 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 SLC16A13Q7RTY0 426 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 DEDD2Q8WXF8 326 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 MARC2Q969Z3 335 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 RCHY1Q96PM5 261 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 IGHV7-4-1A0A0J9YVY3 117 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 MPTX1A8MV57 137 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 H3BP45 60 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 PNRC1Q12796 327 aaPredicted RBP7.22□□□□□ -1.25
SPG11-214ENST00000558989 DHRS2Q13268 280 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 PRSS54Q6PEW0 395 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 C19orf73Q9NVV2 129 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 SMPXQ9UHP9 88 aa7.22□□□□□ -1.25
SPG11-214ENST00000558989 A0A1B0GW15 77 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 RPS10-NUDT3A0A1W2PQS6 291 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 CXorf65A6NEN9 183 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 H3BTX0 84 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 HAGHQ16775 308 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 LAMTOR1Q6IAA8 161 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 Q6ZWC4 215 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 LYG2Q86SG7 212 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 OR4X1Q8NH49 305 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 TMEM37Q8WXS4 190 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms