RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C2orf83Q53S99 150 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 ETFRF1Q6IPR1 90 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 ZNF767PQ75MW2 155 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 OR1S2Q8NGQ3 325 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 OR1S1Q8NH92 325 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 RAB2BQ8WUD1 216 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 PRRT1Q99946 306 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 MFFQ9GZY8 342 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 RBKSQ9H477 322 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 CCDC59Q9P031 241 aaKnown RBP5.33□□□□□ -1.56
SPG11-213ENST00000558988 SCP2D1Q9UJQ7 156 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 GPR132Q9UNW8 380 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 KCNIP3Q9Y2W7 256 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 TRAV2A0A0B4J234 112 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 HELTA6NFD8 242 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 FABP12A6NFH5 140 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 CCDC160A6NGH7 325 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 ZFP92A6NM28 416 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 IGLL5B9A064 214 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 RD3LP0DJH9 198 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 IAPPP10997 89 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 CRYBB3P26998 211 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 FXYD7P58549 80 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 LYZP61626 148 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 OR2F1Q13607 317 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 SMCO1Q147U7 214 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 SURF2Q15527 256 aaPredicted RBP5.32□□□□□ -1.56
SPG11-213ENST00000558988 BSXQ3C1V8 233 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 PYDC2Q56P42 97 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 PVRIGQ6DKI7 326 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 LYZL2Q7Z4W2 148 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 TRPT1Q86TN4 253 aaKnown RBP5.32□□□□□ -1.56
SPG11-213ENST00000558988 LGI3Q8N145 548 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 CENPSQ8N2Z9 138 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 OR51G1Q8NGK1 321 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 OR52E5Q8NH55 327 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 MCFD2Q8NI22 146 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 DYNC2LI1Q8TCX1 351 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 RNASEH2CQ8TDP1 164 aaKnown RBP5.32□□□□□ -1.56
SPG11-213ENST00000558988 DTD1Q8TEA8 209 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 TMEM170AQ8WVE7 144 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 PPP1R14BQ96C90 147 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 RAB40CQ96S21 281 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 C11orf68Q9H3H3 251 aaKnown RBP5.32□□□□□ -1.56
SPG11-213ENST00000558988 XCL2Q9UBD3 114 aa5.32□□□□□ -1.56
SPG11-213ENST00000558988 RYR3Q15413 4870 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 IGHV3OR16-12A0A075B7B8 117 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 ANKRD20A5PA0PJZ0 165 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 RBMY1A1P0DJD3 496 aaKnown RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 RBMY1CP0DJD4 496 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 SPP1P10451 314 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 ANXA3P12429 323 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 BTF3P20290 206 aaKnown RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 HLA-DMBP28068 263 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 TNFSF8P32971 234 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 EMP1P54849 157 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 DEFB1P60022 68 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 YPEL3P61236 119 aaPredicted RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 SNRPD3P62318 126 aaKnown RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 RBMY1FQ15415 496 aaKnown RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 C2CD4CQ8TF44 421 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 DCANP1Q8TF63 244 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 GLMPQ8WWB7 406 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 SLC35E1Q96K37 410 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 LINC00052Q96N35 136 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 SCGB3A2Q96PL1 93 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 RSL24D1Q9UHA3 163 aaKnown RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 TBC1D24Q9ULP9 559 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 TMEM56-RWDD3S4R434 201 aa5.31□□□□□ -1.56
SPG11-213ENST00000558988 HUWE1Q7Z6Z7 4374 aaKnown RBP5.31□□□□□ -1.56
SPG11-213ENST00000558988 A0A087WWL8 130 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 A0A0B4J2A0 478 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 PRSS29PA6NIE9 313 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 FAM90A26D6RGX4 464 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 H3BMQ9 156 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 CTDSPLO15194 276 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 GSTZ1O43708 216 aaPredicted RBP5.3□□□□□ -1.56
SPG11-213ENST00000558988 TOMM40O96008 361 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 GIG44P09565 113 aaPredicted RBP5.3□□□□□ -1.56
SPG11-213ENST00000558988 PSG1P11464 419 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 FAUP35544 74 aaKnown RBP5.3□□□□□ -1.56
SPG11-213ENST00000558988 CCR6P51684 374 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 TMBIM6P55061 237 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 SUPT4H1P63272 117 aaKnown RBP5.3□□□□□ -1.56
SPG11-213ENST00000558988 NMSQ5H8A3 153 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 MORN3Q6PF18 240 aaPredicted RBP5.3□□□□□ -1.56
SPG11-213ENST00000558988 SIGLEC15Q6ZMC9 328 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 NOXA1Q86UR1 476 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 TOMM5Q8N4H5 51 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 Q8NAQ8 132 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 COQ8AQ8NI60 647 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 IL22RA2Q969J5 263 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 RNF125Q96EQ8 232 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 SLIRPQ9GZT3 109 aaKnown RBP5.3□□□□□ -1.56
SPG11-213ENST00000558988 MAGT1Q9H0U3 335 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 NRN1Q9NPD7 142 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 SHPKQ9UHJ6 478 aa5.3□□□□□ -1.56
SPG11-213ENST00000558988 LINC00854A0A1B0GVQ3 168 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 F5H697 171 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms