RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SELENOTP62341 195 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 ZFP69Q49AA0 526 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 RPL7L1Q6DKI1 246 aaKnown RBP9.39□□□□□ -0.91
GABPB1-208ENST00000558970 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 GBGT1Q8N5D6 347 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 MARC2Q969Z3 335 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 PRR25Q96S07 402 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 GPR61Q9BZJ8 451 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
GABPB1-208ENST00000558970 NOTCH1P46531 2555 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 C17orf112F2Z3M2 114 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 PFDN1O60925 122 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 MPDU1O75352 247 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 HYPMO75409 117 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 C8orf88P0DMB2 117 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 INSL3P51460 131 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 NKX2-5P52952 324 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-208ENST00000558970 ZNF266Q14584 549 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 GCSAMLQ5JQS6 135 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 Q6ZRG5 221 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 RBPMS2Q6ZRY4 209 aaKnown RBP9.38□□□□□ -0.91
GABPB1-208ENST00000558970 TCF24Q7RTU0 167 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 WFDC3Q8IUB2 231 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 GRAMD2BQ96HH9 432 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 NEURL2Q9BR09 285 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 ARV1Q9H2C2 271 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 SLC39A9Q9NUM3 307 aa9.38□□□□□ -0.91
GABPB1-208ENST00000558970 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 A0A1W2PS18 150 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 CFDP00746 253 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-208ENST00000558970 RPL29P47914 159 aaKnown RBP9.37□□□□□ -0.91
GABPB1-208ENST00000558970 PRR20EP86478 221 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 PRR20CP86479 221 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 PRR20DP86480 221 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 PRR20BP86481 221 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 PRR20AP86496 221 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 FFAR4Q5NUL3 377 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 C10orf113Q5VZT2 155 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 LCN12Q6JVE5 192 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 TMUB2Q71RG4 321 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 KCNRGQ8N5I3 272 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 ARPC5LQ9BPX5 153 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 SH3BGRL3Q9H299 93 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 SIGLEC8Q9NYZ4 499 aa9.37□□□□□ -0.91
GABPB1-208ENST00000558970 TECRQ9NZ01 308 aaKnown RBP9.37□□□□□ -0.91
GABPB1-208ENST00000558970 BORCS7-ASMTA0A0B4J1R7 106 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
GABPB1-208ENST00000558970 SNRPCP09234 159 aaKnown RBP9.36□□□□□ -0.91
GABPB1-208ENST00000558970 GP9P14770 177 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 BMI1P35226 326 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 DEFA6Q01524 100 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 ZNF345Q14585 488 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 MORN5Q5VZ52 161 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 LAMTOR1Q6IAA8 161 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 LINC00305Q7Z4B0 112 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 STXBP6Q8NFX7 210 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 HYLS1Q96M11 299 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 ZNF471Q9BX82 626 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-208ENST00000558970 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-208ENST00000558970 TMEM231Q9H6L2 316 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
GABPB1-208ENST00000558970 TRAV5A0A0B4J249 113 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 A0A0D9SG52 128 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 H3BRN7 92 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 BCL2L11O43521 198 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 BUB3O43684 328 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 LGALSLQ3ZCW2 172 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-208ENST00000558970 C16orf54Q6UWD8 224 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 SIGLEC15Q6ZMC9 328 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 OR1L4Q8NGR5 311 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 GLMPQ8WWB7 406 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 SLC25A32Q9H2D1 315 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 KCNIP2Q9NS61 270 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-208ENST00000558970 U3KQE9 123 aa9.35□□□□□ -0.91
GABPB1-208ENST00000558970 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
GABPB1-208ENST00000558970 DNASE2O00115 360 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-208ENST00000558970 TAAR5O14804 337 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 PLP1P60201 277 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 EGFEM1PQ0D2K5 195 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 SPATA31B1PQ5VZV4 182 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 PFDN5Q99471 154 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-208ENST00000558970 DNAJC4Q9NNZ3 241 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 UBQLN2Q9UHD9 624 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
GABPB1-208ENST00000558970 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
GABPB1-208ENST00000558970 ZNF785A8K8V0 405 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms