RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TMEM250H0YL14 139 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 NUPL2O15504 423 aaKnown RBP5.73□□□□□ -1.49
SPG11-204ENST00000557866 TOMM40O96008 361 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 IGHG2P01859 326 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 RD3LP0DJH9 198 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 PYYP10082 97 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 IER3P46695 156 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 RHOGP84095 191 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 KRTAP1-1Q07627 177 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 AWAT1Q58HT5 328 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 C9orf152Q5JTZ5 239 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 CST9LP1Q5W188 147 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 TMEM88Q6PEY1 159 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 PQLC2Q6ZP29 291 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 C16orf82Q7Z2V1 217 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 LINC00305Q7Z4B0 112 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 CBLN2Q8IUK8 224 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 OR5AU1Q8NGC0 362 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 OR51G1Q8NGK1 321 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 OR4F5Q8NH21 305 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 ZNF502Q8TBZ5 544 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 VN1R17PQ8TDU5 208 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 TMEM68Q96MH6 324 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 OR4F4Q96R69 305 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 PFDN5Q99471 154 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 FOXC2Q99958 501 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 C20orf24Q9BUV8 137 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 MRPL27Q9P0M9 148 aaKnown RBP5.73□□□□□ -1.49
SPG11-204ENST00000557866 PDZD2O15018 2839 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 ZANQ9Y493 2812 aa5.73□□□□□ -1.49
SPG11-204ENST00000557866 ANKRD17O75179 2603 aaKnown RBP5.73□□□□□ -1.49
SPG11-204ENST00000557866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.73□□□□□ -1.49
SPG11-204ENST00000557866 TRAV41A0A0B4J266 112 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 WI2-2373I1.2A0A1W2PRP0 233 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 C7orf77A4D0Y5 90 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 M0R036 132 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 OR7C2O60412 319 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 IGF1P05019 195 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 CTSGP08311 255 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 OR10J4P0C629 311 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 HIST1H1BP16401 226 aaKnown RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 FCGR2BP31994 310 aaPredicted RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 TAS2R45P59539 299 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 YPEL3P61236 119 aaPredicted RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 LYZP61626 148 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 C15orf32Q32M92 178 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 Q56UQ5 140 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 LEMD1Q68G75 181 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 ZNF343Q6P1L6 599 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 Q6YL49 198 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 ZNF491Q8N8L2 437 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 RPUSD4Q96CM3 377 aaKnown RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 FXYD5Q96DB9 178 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 NOL4LQ96MY1 436 aaPredicted RBP5.72□□□□□ -1.49
SPG11-204ENST00000557866 MS4A10Q96PG2 267 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 CHRDL1Q9BU40 450 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 PAXXQ9BUH6 204 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 PRDM13Q9H4Q3 707 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 SDF2L1Q9HCN8 221 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 TMEM167BQ9NRX6 74 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 THYN1Q9P016 225 aa5.72□□□□□ -1.49
SPG11-204ENST00000557866 CSPG4Q6UVK1 2322 aa5.71□□□□□ -1.49
SPG11-204ENST00000557866 CR1P17927 2039 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 TRAV30A0A087WSZ9 112 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 OR2T8A6NH00 312 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 ZNF727A8MUV8 499 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 GGTLC3B5MD39 225 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 F6UZH7 168 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 M0QZK8 103 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 PDE6DO43924 150 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 GNG7O60262 68 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 OR2C1O95371 312 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 SNRPCP09234 159 aaKnown RBP5.71□□□□□ -1.5
SPG11-204ENST00000557866 GP9P14770 177 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 CFHR3Q02985 330 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 USF2Q15853 346 aaPredicted RBP5.71□□□□□ -1.5
SPG11-204ENST00000557866 ZNF674Q2M3X9 581 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 IL17RELQ6ZVW7 336 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 NECAP1Q8NC96 275 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 C11orf52Q96A22 123 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 TVP23CQ96ET8 276 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 TXN2Q99757 166 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 TXNDC17Q9BRA2 123 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 NIPSNAP3BQ9BS92 247 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 SHANK2-AS3Q9BTD1 123 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 DERL1Q9BUN8 251 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 SLC25A39Q9BZJ4 359 aaPredicted RBP5.71□□□□□ -1.5
SPG11-204ENST00000557866 KLK15Q9H2R5 256 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 PARLQ9H300 379 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 OR51M1Q9H341 326 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 RPS10P5Q9NQ39 176 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 PITPNC1Q9UKF7 332 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 HIGD1AQ9Y241 93 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 ARL2-SNX15V9GYD0 113 aa5.71□□□□□ -1.5
SPG11-204ENST00000557866 A0A1W2PRE2 83 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 H3BRN7 92 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 MRPS12O15235 138 aaKnown RBP5.7□□□□□ -1.5
SPG11-204ENST00000557866 NDUFB4O95168 129 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms