RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CAMLGP49069 296 aa11.12□□□□□ -0.63
VIPAS39-210ENST00000557466 OPCMLQ14982 345 aa11.12□□□□□ -0.63
VIPAS39-210ENST00000557466 OR1B1Q8NGR6 318 aa11.12□□□□□ -0.63
VIPAS39-210ENST00000557466 NEURL2Q9BR09 285 aa11.12□□□□□ -0.63
VIPAS39-210ENST00000557466 SMIM3Q9BZL3 60 aa11.12□□□□□ -0.63
VIPAS39-210ENST00000557466 NUP62P37198 522 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 TFPI2P48307 235 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 PLP1P60201 277 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 MIC13Q5XKP0 118 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 GBGT1Q8N5D6 347 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 PPP1R14BQ96C90 147 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 ATP5SQ99766 215 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 WFDC10AQ9H1F0 79 aa11.11□□□□□ -0.63
VIPAS39-210ENST00000557466 FXYD6-FXYD2A0A087WZ82 144 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 OR4C46A6NHA9 309 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 SMLR1H3BR10 107 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 H3BRN7 92 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 CD5P06127 495 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 RPL11P62913 178 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 PRR20EP86478 221 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 PRR20CP86479 221 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 PRR20DP86480 221 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 PRR20BP86481 221 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 PRR20AP86496 221 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 RAB31Q13636 194 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 HIGD1AQ9Y241 93 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
VIPAS39-210ENST00000557466 HELTA6NFD8 242 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 MPDU1O75352 247 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 HYPMO75409 117 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 OR5G3P0C626 314 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 PATE2Q6UY27 113 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 STXBP6Q8NFX7 210 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 UHRF2Q96PU4 802 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 MS4A6AQ9H2W1 248 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 WFDC1Q9HC57 220 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 C19orf73Q9NVV2 129 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 FBXL17Q9UF56 701 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 PFDN2Q9UHV9 154 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 PXMP4Q9Y6I8 212 aa11.09□□□□□ -0.63
VIPAS39-210ENST00000557466 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 RPL29P47914 159 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 ODF3L2Q3SX64 289 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 PXDC1Q5TGL8 231 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 WFDC3Q8IUB2 231 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 SHANK2-AS3Q9BTD1 123 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 SLC25A32Q9H2D1 315 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 SLC25A22Q9H936 323 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 SLC39A9Q9NUM3 307 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 TNFSF18Q9UNG2 199 aa11.08□□□□□ -0.64
VIPAS39-210ENST00000557466 hCG_2014768A0A024R1R8 64 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 DNASE2O00115 360 aaPredicted RBP11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 COX7A2P2O60397 106 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 B2MP61769 119 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 FAM24BQ8N5W8 94 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 DCANP1Q8TF63 244 aa11.07□□□□□ -0.64
VIPAS39-210ENST00000557466 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 K7EQG2 157 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 IFNA5P01569 189 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 AP2S1P53680 142 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 Q6ZRG5 221 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 INO80EQ8NBZ0 244 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 RSG1Q9BU20 258 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 MAP6D1Q9H9H5 199 aa11.06□□□□□ -0.64
VIPAS39-210ENST00000557466 A8MZ25 164 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 ARPC5O15511 151 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 FRMD6-AS1P0C7T7 363 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 S100A7P31151 101 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 C10orf113Q5VZT2 155 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 ST6GAL2Q96JF0 529 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 SRD5A3Q9H8P0 318 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 NRN1Q9NPD7 142 aa11.05□□□□□ -0.64
VIPAS39-210ENST00000557466 PRKDCP78527 4128 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 TGP01266 2768 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 C17orf112F2Z3M2 114 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms