RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FXYD7P58549 80 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 GGNBP1Q5YKI7 109 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 OR8I2Q8N0Y5 310 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 TOMM5Q8N4H5 51 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 COQ8AQ8NI60 647 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
TUBB3-213ENST00000557262 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 ISLRO14498 428 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 CFDP00746 253 aaPredicted RBP11.38□□□□□ -0.59
TUBB3-213ENST00000557262 P0DMU3 169 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 FAM231AP0DMU4 169 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 FAM231CP0DMU5 169 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 VAMP1P23763 118 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 RPP30P78346 268 aaKnown RBP11.38□□□□□ -0.59
TUBB3-213ENST00000557262 PYDC2Q56P42 97 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 EBLN2Q6P2I7 272 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 CIB3Q96Q77 187 aaPredicted RBP11.38□□□□□ -0.59
TUBB3-213ENST00000557262 SLC25A21Q9BQT8 299 aaPredicted RBP11.38□□□□□ -0.59
TUBB3-213ENST00000557262 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
TUBB3-213ENST00000557262 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 EMP1P54849 157 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 PAX9P55771 341 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 PSG9Q00887 426 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 ZNF79Q15937 498 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 TRIM63Q969Q1 353 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 SCRT1Q9BWW7 348 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
TUBB3-213ENST00000557262 SYNGR2O43760 224 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 SFT2D2O95562 160 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 MEOX2P50222 304 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 FAM78BQ5VT40 261 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 GSG1LQ6UXU4 331 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 LINC00336Q6ZUF6 198 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 DEDD2Q8WXF8 326 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 SLC35B3Q9H1N7 401 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 RPRMQ9NS64 109 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
TUBB3-213ENST00000557262 A0A0J9YX75 114 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 TEX48A0A1B0GUV7 120 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 PRSS46E5RG02 174 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 F6UB75 175 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 WRBO00258 174 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 GALR1P47211 349 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 C16orf92Q96LL3 132 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 RSG1Q9BU20 258 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 GOLT1BQ9Y3E0 138 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 V9GYH0 126 aa11.35□□□□□ -0.59
TUBB3-213ENST00000557262 ZNF98A6NK75 572 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 HOXB5P09067 269 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 S100A5P33763 92 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 PPP1R1AQ13522 171 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 SPANXN5Q5MJ07 72 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 BPIFCQ8NFQ6 507 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
TUBB3-213ENST00000557262 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 SLC25A22Q9H936 323 aa11.34□□□□□ -0.59
TUBB3-213ENST00000557262 HBE1P02100 147 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 ORM2P19652 201 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 S100A7P31151 101 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 OXA1LQ15070 435 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 C20orf173Q96LM9 149 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 GPR82Q96P67 336 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 SLC25A32Q9H2D1 315 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 DOK5Q9P104 306 aa11.33□□□□□ -0.6
TUBB3-213ENST00000557262 IFNA21P01568 189 aa11.32□□□□□ -0.6
TUBB3-213ENST00000557262 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
TUBB3-213ENST00000557262 TMEM182Q6ZP80 229 aaPredicted RBP11.32□□□□□ -0.6
TUBB3-213ENST00000557262 OR1B1Q8NGR6 318 aa11.32□□□□□ -0.6
TUBB3-213ENST00000557262 C17orf77Q96MU5 243 aa11.32□□□□□ -0.6
TUBB3-213ENST00000557262 TMEM147Q9BVK8 224 aa11.32□□□□□ -0.6
TUBB3-213ENST00000557262 STRAPQ9Y3F4 350 aaKnown RBP11.32□□□□□ -0.6
TUBB3-213ENST00000557262 FAT2Q9NYQ8 4349 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 KIAA1109Q2LD37 5005 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 A8MTW9 85 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 ID3Q02535 119 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 AKR1C1Q04828 323 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 RRN3P1Q2M238 152 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 CCDC190Q86UF4 302 aa11.31□□□□□ -0.6
TUBB3-213ENST00000557262 YTHDF2Q9Y5A9 579 aaKnown RBP11.31□□□□□ -0.6
TUBB3-213ENST00000557262 DNAH2Q9P225 4427 aa11.3□□□□□ -0.6
TUBB3-213ENST00000557262 M0R2N4 97 aa11.3□□□□□ -0.6
TUBB3-213ENST00000557262 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
TUBB3-213ENST00000557262 UBE2MP61081 183 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms