RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
PCNX4-213ENST00000556907 SEC14L6B5MCN3 397 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 WIPF1O43516 503 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 OR2C1O95371 312 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 PSG1P11464 419 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 GATA2P23769 480 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-213ENST00000556907 SYNJ2BPP57105 145 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 ZNF600Q6ZNG1 722 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 REC114Q7Z4M0 266 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 OR9G4Q8NGQ1 327 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 PFDN5Q99471 154 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 CHRDL1Q9BU40 450 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 RPRMQ9NS64 109 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 SIGLEC8Q9NYZ4 499 aa12.54□□□□□ -0.4
PCNX4-213ENST00000556907 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 ZNF705EA8MWA4 302 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-213ENST00000556907 NDUFA4O00483 81 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 OR5G3P0C626 314 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 IGLL1P15814 213 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 SAMD5Q5TGI4 173 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 Q6ZRG5 221 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 OR1L4Q8NGR5 311 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 RNF2Q99496 336 aa12.53□□□□□ -0.4
PCNX4-213ENST00000556907 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
PCNX4-213ENST00000556907 CTXND1A0A1B0GTU2 59 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 RD3LP0DJH9 198 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-213ENST00000556907 RAB14P61106 215 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 BLOC1S1P78537 153 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 RPP25LQ8N5L8 163 aaKnown RBP12.52□□□□□ -0.41
PCNX4-213ENST00000556907 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 ZFAND3Q9H8U3 227 aa12.52□□□□□ -0.41
PCNX4-213ENST00000556907 A8MWP6 167 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 FHITP49789 147 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 RHOBP62745 196 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 FAM122CQ6P4D5 195 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 Q8WTZ3 238 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 SLC25A22Q9H936 323 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
PCNX4-213ENST00000556907 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-213ENST00000556907 K7EMT4 169 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 IL4P05112 153 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 LYZP61626 148 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 OXLD1Q5BKU9 147 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 KPRPQ5T749 579 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-213ENST00000556907 C10orf113Q5VZT2 155 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 SSX7Q7RTT5 188 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 TMEM37Q8WXS4 190 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 TMEM190Q8WZ59 177 aa12.5□□□□□ -0.41
PCNX4-213ENST00000556907 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-213ENST00000556907 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCNX4-213ENST00000556907 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 HYPMO75409 117 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 SAP30O75446 220 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 PATE2Q6UY27 113 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 OR1B1Q8NGR6 318 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 LYPD6BQ8NI32 183 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 PCNPQ8WW12 178 aaKnown RBP12.49□□□□□ -0.41
PCNX4-213ENST00000556907 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 DOK5Q9P104 306 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 FUT9Q9Y231 359 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 HIGD1AQ9Y241 93 aa12.49□□□□□ -0.41
PCNX4-213ENST00000556907 CMYA5Q8N3K9 4069 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 TRAV1-1A0A0B4J248 108 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 G3V4G9 280 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 HBE1P02100 147 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 H2AFB1P0C5Y9 115 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 EGFEM1PQ0D2K5 195 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
PCNX4-213ENST00000556907 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 TOMM20LQ6UXN7 152 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 IL34Q6ZMJ4 242 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 RAB24Q969Q5 203 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 DNAJC4Q9NNZ3 241 aa12.48□□□□□ -0.41
PCNX4-213ENST00000556907 DAZ1Q9NQZ3 744 aaKnown RBP12.48□□□□□ -0.41
PCNX4-213ENST00000556907 MRPL27Q9P0M9 148 aaKnown RBP12.48□□□□□ -0.41
PCNX4-213ENST00000556907 C2orf70A6NJV1 201 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 H3BRN7 92 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 CSN3P07498 182 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 ORM2P19652 201 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 S100A7AQ86SG5 101 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
PCNX4-213ENST00000556907 PBDC1Q9BVG4 233 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms