RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 OR1B1Q8NGR6 318 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 KIR2DL5BQ8NHK3 375 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 C2orf50Q96LR7 162 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 C11orf1Q9H5F2 150 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 DOK5Q9P104 306 aa7.62□□□□□ -1.19
SNX6-208ENST00000556712 A0A0J9YWU9 116 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 UBE2CO00762 179 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 GOSR2O14653 212 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 SIX6O95475 246 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 ORM2P19652 201 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 C4BPBP20851 252 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 NUP62P37198 522 aaPredicted RBP7.61□□□□□ -1.19
SNX6-208ENST00000556712 BCAP31P51572 246 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 TAS2R30P59541 319 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 DEFB1P60022 68 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 EWSR1Q01844 656 aaKnown RBP eCLIP7.61□□□□□ -1.19
SNX6-208ENST00000556712 SLC38A11Q08AI6 406 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 RAB32Q13637 225 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 CYP2G1PQ6ZSU1 146 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 TMEM144Q7Z5S9 345 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 TRPT1Q86TN4 253 aaKnown RBP7.61□□□□□ -1.19
SNX6-208ENST00000556712 STHQ8IWL8 128 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 BPIFCQ8NFQ6 507 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 OR10P1Q8NGE3 313 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 RNF183Q96D59 192 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 CSTL1Q9H114 145 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 SLC25A32Q9H2D1 315 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 SLC25A22Q9H936 323 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 MGAT4CQ9UBM8 478 aa7.61□□□□□ -1.19
SNX6-208ENST00000556712 FAM24AA6NFZ4 105 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 INMT-MINDY4F8WBC2 141 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 CST7O76096 145 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 LINC00869P0C866 280 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 CAV2P51636 162 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 AP2S1P53680 142 aaPredicted RBP7.6□□□□□ -1.19
SNX6-208ENST00000556712 ACTL10Q5JWF8 245 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 SCRT1Q9BWW7 348 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 TP53TG1Q9Y2A0 90 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 LYSTQ99698 3801 aa7.6□□□□□ -1.19
SNX6-208ENST00000556712 IGSF23A1L1A6 192 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 ZNF98A6NK75 572 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 SOCS3O14543 225 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 IL15RAQ13261 267 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 GDF5OSQ5U4N7 250 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 OR8I2Q8N0Y5 310 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 TMEM217Q8N7C4 229 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 UHRF2Q96PU4 802 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 GPN1Q9HCN4 374 aaPredicted RBP7.59□□□□□ -1.19
SNX6-208ENST00000556712 FBXL17Q9UF56 701 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
SNX6-208ENST00000556712 FNDC10F2Z333 226 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 H3BRN7 92 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 PRAF2O60831 178 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 CFDP00746 253 aaPredicted RBP7.58□□□□□ -1.2
SNX6-208ENST00000556712 GIG44P09565 113 aaPredicted RBP7.58□□□□□ -1.2
SNX6-208ENST00000556712 OR5G3P0C626 314 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 DEFA1P59665 94 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 DEFA3P59666 94 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
SNX6-208ENST00000556712 PMS2P11Q13670 270 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 LRRC37A5PQ49AS3 106 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 C1orf194Q5T5A4 169 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 TEPPQ6URK8 271 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 IL17DQ8TAD2 202 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 C17orf77Q96MU5 243 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 LINC00052Q96N35 136 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 MGST2Q99735 147 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 SLC25A39Q9BZJ4 359 aaPredicted RBP7.58□□□□□ -1.2
SNX6-208ENST00000556712 ARL6Q9H0F7 186 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 NPVFQ9HCQ7 196 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 LYRM2Q9NU23 88 aaPredicted RBP7.58□□□□□ -1.2
SNX6-208ENST00000556712 CLEC5AQ9NY25 188 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 SLC45A2Q9UMX9 530 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 HIGD1AQ9Y241 93 aa7.58□□□□□ -1.2
SNX6-208ENST00000556712 UBE2L5PA0A1B0GUS4 154 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 AGPAT2O15120 278 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 IGKV3-20P01619 116 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 PVALBP20472 110 aaPredicted RBP7.57□□□□□ -1.2
SNX6-208ENST00000556712 GALR1P47211 349 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 RAP2BP61225 183 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 OR11H2Q8NH07 326 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 C20orf173Q96LM9 149 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 RARRES2Q99969 163 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 MARVELD1Q9BSK0 173 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 SHANK2-AS3Q9BTD1 123 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 OR5AC2Q9NZP5 309 aa7.57□□□□□ -1.2
SNX6-208ENST00000556712 F6UB75 175 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 DEFB4AO15263 64 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 HYPMO75409 117 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 DEDDO75618 318 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
SNX6-208ENST00000556712 SPP1P10451 314 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 HLA-DRB4P13762 266 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 PSMB3P49720 205 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 SULT1A1P50225 295 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 PLP1P60201 277 aa7.56□□□□□ -1.2
SNX6-208ENST00000556712 SELENOTP62341 195 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms