RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 GBGT1Q8N5D6 347 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 C12orf45Q8N5I9 185 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 SLC24A4Q8NFF2 622 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 OR52E5Q8NH55 327 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 DEDD2Q8WXF8 326 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 BSCL2Q96G97 398 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TXN2Q99757 166 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 C20orf85Q9H1P6 137 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 GPN1Q9HCN4 374 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 NUDT15Q9NV35 164 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 PSENENQ9NZ42 101 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 CACFD1Q9UGQ2 172 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TMED3Q9Y3Q3 217 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 LSM5Q9Y4Y9 91 aaKnown RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 SMAD5-AS1Q9Y6J3 95 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 FBN3Q75N90 2809 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TRAV30A0A087WSZ9 112 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 DUXBA0A1W2PPF3 345 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 ZFP92A6NM28 416 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 MPTX1A8MV57 137 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 H3BP45 60 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 LGALS9O00182 355 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 NDUFA4O00483 81 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 SSNA1O43805 119 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 SSSCA1O60232 199 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GAGE7O76087 117 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 P0C879 139 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 IGHV4-30-4P0DP06 118 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 NPPCP23582 126 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 OR10J1P30954 320 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 NKX2-1P43699 371 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 RND2P52198 227 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 CD81P60033 236 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 S100A10P60903 97 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 RRAS2P62070 204 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 POLR2GP62487 172 aaKnown RBP eCLIP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 EGFEM1PQ0D2K5 195 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GAGE1Q13065 139 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GAGE4Q13068 117 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 OR2F1Q13607 317 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 DEFB114Q30KQ6 69 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 NMSQ5H8A3 153 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 BTNL8Q6UX41 500 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GSG1LQ6UXU4 331 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 IL34Q6ZMJ4 242 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 ZNF114Q8NC26 417 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 TMEM116Q8NCL8 245 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 ZNF431Q8TF32 576 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 Q8WTZ3 238 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 NARS2Q96I59 477 aaKnown RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 SLC35E1Q96K37 410 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 OR10C1Q96KK4 312 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 GINS3Q9BRX5 216 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 PBDC1Q9BVG4 233 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 TECRQ9NZ01 308 aaKnown RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 MRPL27Q9P0M9 148 aaKnown RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 MLXQ9UH92 298 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 UBQLN2Q9UHD9 624 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 STRAPQ9Y3F4 350 aaKnown RBP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 PUS1Q9Y606 427 aaKnown RBP eCLIP3.5□□□□□ -1.85
ATXN3-238ENST00000556288 U3KQ87 197 aa3.5□□□□□ -1.85
ATXN3-238ENST00000556288 TGP01266 2768 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 OR11H12B2RN74 326 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 INMT-MINDY4F8WBC2 141 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 J3KRW8 73 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 GOSR2O14653 212 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 CLN5O75503 358 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 SIX6O95475 246 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 RD3LP0DJH9 198 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 SLC25A4P12235 298 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 BTCP35070 178 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 PAFAH1B2P68402 229 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 PAPPA-AS1Q5QFB9 102 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 WDR73Q6P4I2 378 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 PRSS54Q6PEW0 395 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 TOMM20LQ6UXN7 152 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 ADAMTSL5Q6ZMM2 481 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 ZNF600Q6ZNG1 722 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 TCF24Q7RTU0 167 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 SLC16A13Q7RTY0 426 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 DEFB125Q8N687 156 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 LRTM2Q8N967 370 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 OR1S2Q8NGQ3 325 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
ATXN3-238ENST00000556288 GRAMD2BQ96HH9 432 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 CIB3Q96Q77 187 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-238ENST00000556288 METTL26Q96S19 204 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 RHPN1-AS1Q9BWJ2 59 aa3.49□□□□□ -1.85
ATXN3-238ENST00000556288 C1QTNF4Q9BXJ3 329 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms