RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
SNX6-203ENST00000555416 UBE2CO00762 179 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 SIX6O95475 246 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 FABP1P07148 127 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 DEFB1P60022 68 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 DLK1P80370 383 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 PSMG4Q5JS54 123 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 NRN1Q9NPD7 142 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 DOK5Q9P104 306 aa10.02□□□□□ -0.81
SNX6-203ENST00000555416 TENM2Q9NT68 2774 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 FAM24AA6NFZ4 105 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 ORM2P19652 201 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 RAB32Q13637 225 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 ACTL10Q5JWF8 245 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
SNX6-203ENST00000555416 TP53TG1Q9Y2A0 90 aa10.01□□□□□ -0.81
SNX6-203ENST00000555416 A0A0J9YWU9 116 aa10□□□□□ -0.81
SNX6-203ENST00000555416 INMT-MINDY4F8WBC2 141 aa10□□□□□ -0.81
SNX6-203ENST00000555416 SOCS3O14543 225 aa10□□□□□ -0.81
SNX6-203ENST00000555416 AP2S1P53680 142 aaPredicted RBP10□□□□□ -0.81
SNX6-203ENST00000555416 S100A10P60903 97 aa10□□□□□ -0.81
SNX6-203ENST00000555416 SLC38A11Q08AI6 406 aa10□□□□□ -0.81
SNX6-203ENST00000555416 C1orf194Q5T5A4 169 aa10□□□□□ -0.81
SNX6-203ENST00000555416 BPIFCQ8NFQ6 507 aa10□□□□□ -0.81
SNX6-203ENST00000555416 OR10P1Q8NGE3 313 aa10□□□□□ -0.81
SNX6-203ENST00000555416 OR1B1Q8NGR6 318 aa10□□□□□ -0.81
SNX6-203ENST00000555416 PPP1R14BQ96C90 147 aa10□□□□□ -0.81
SNX6-203ENST00000555416 MARVELD1Q9BSK0 173 aa10□□□□□ -0.81
SNX6-203ENST00000555416 SCRT1Q9BWW7 348 aa10□□□□□ -0.81
SNX6-203ENST00000555416 SLC25A32Q9H2D1 315 aa10□□□□□ -0.81
SNX6-203ENST00000555416 RYR3Q15413 4870 aa10□□□□□ -0.81
SNX6-203ENST00000555416 IGSF23A1L1A6 192 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 ZNF98A6NK75 572 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 FNDC10F2Z333 226 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 L7N2F9 121 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 GOSR2O14653 212 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 CST7O76096 145 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
SNX6-203ENST00000555416 C4BPBP20851 252 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 VAMP2P63027 116 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 STHQ8IWL8 128 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 SLC25A22Q9H936 323 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 NPVFQ9HCQ7 196 aa9.99□□□□□ -0.81
SNX6-203ENST00000555416 DEDDO75618 318 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 LINC00869P0C866 280 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 NUP62P37198 522 aaPredicted RBP9.98□□□□□ -0.81
SNX6-203ENST00000555416 BCAP31P51572 246 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 CAV2P51636 162 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 PATE2Q6UY27 113 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 OR8I2Q8N0Y5 310 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 TMEM217Q8N7C4 229 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 C20orf173Q96LM9 149 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 UHRF2Q96PU4 802 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 MGST2Q99735 147 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 GPN1Q9HCN4 374 aaPredicted RBP9.98□□□□□ -0.81
SNX6-203ENST00000555416 MGAT4CQ9UBM8 478 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 SLC45A2Q9UMX9 530 aa9.98□□□□□ -0.81
SNX6-203ENST00000555416 H3BRN7 92 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 AGPAT2O15120 278 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 CFDP00746 253 aaPredicted RBP9.97□□□□□ -0.81
SNX6-203ENST00000555416 H2BFSP57053 126 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 PLP1P60201 277 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 TEPPQ6URK8 271 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 TMEM252Q8N6L7 170 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 SHANK2-AS3Q9BTD1 123 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 TMEM147Q9BVK8 224 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 SLC25A39Q9BZJ4 359 aaPredicted RBP9.97□□□□□ -0.81
SNX6-203ENST00000555416 LYRM2Q9NU23 88 aaPredicted RBP9.97□□□□□ -0.81
SNX6-203ENST00000555416 FBXL17Q9UF56 701 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 PFDN2Q9UHV9 154 aa9.97□□□□□ -0.81
SNX6-203ENST00000555416 H0YIZ8 118 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 H3BMM0 161 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 PRAF2O60831 178 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 HYPMO75409 117 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 SNRPD3P62318 126 aaKnown RBP9.96□□□□□ -0.82
SNX6-203ENST00000555416 IGFL4Q6B9Z1 124 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 OR11H2Q8NH07 326 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 IL17DQ8TAD2 202 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 LINC00052Q96N35 136 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 GGACTQ9BVM4 153 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 SEPSECSQ9HD40 501 aaKnown RBP9.96□□□□□ -0.82
SNX6-203ENST00000555416 CLEC5AQ9NY25 188 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 OR5AC2Q9NZP5 309 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 HIGD1AQ9Y241 93 aa9.96□□□□□ -0.82
SNX6-203ENST00000555416 F6UB75 175 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 DEFB4AO15263 64 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 OR5G3P0C626 314 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 DEFA1P59665 94 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 DEFA3P59666 94 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 SELENOTP62341 195 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 MORN5Q5VZ52 161 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 CSNK1G2-AS1Q8NCQ2 148 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 GATAD1Q8WUU5 269 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 RARRES2Q99969 163 aa9.95□□□□□ -0.82
SNX6-203ENST00000555416 ARL6Q9H0F7 186 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms