RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 GPR141Q7Z602 305 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 LYSMD2Q8IV50 215 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 SLC24A4Q8NFF2 622 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 OR10J6PQ8NGY7 276 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 DEFB104AQ8WTQ1 72 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 TMEM170AQ8WVE7 144 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 C16orf92Q96LL3 132 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 HTN1P15515 57 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 HLA-DMAP28067 261 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 SDC2P34741 201 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 TAS2R60P59551 318 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 TSPAN5P62079 268 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 IDNKQ5T6J7 187 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 ETFRF1Q6IPR1 90 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 NFE4Q86UQ8 179 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 RNASE8Q8TDE3 154 aaKnown RBP6.57□□□□□ -1.36
SCFD1-215ENST00000555259 TP53RKQ96S44 253 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 LINC01587Q99440 93 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 VCXQ9H320 206 aa6.57□□□□□ -1.36
SCFD1-215ENST00000555259 HEYLQ9NQ87 328 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-215ENST00000555259 ATG12O94817 140 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 DUSP14O95147 198 aaKnown RBP6.56□□□□□ -1.36
SCFD1-215ENST00000555259 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
SCFD1-215ENST00000555259 CLEC2LP0C7M8 214 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 MEOX2P50222 304 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 UCP3P55916 312 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 SPCS3P61009 180 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 MXD1Q05195 221 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 OR8I2Q8N0Y5 310 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 TMEM256Q8N2U0 113 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 LINC00612Q8N6U2 182 aa6.56□□□□□ -1.36
SCFD1-215ENST00000555259 A0A096LPF7 62 aa6.55□□□□□ -1.36
SCFD1-215ENST00000555259 ADAP1O75689 374 aa6.55□□□□□ -1.36
SCFD1-215ENST00000555259 AARDQ4LEZ3 155 aa6.55□□□□□ -1.36
SCFD1-215ENST00000555259 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
SCFD1-215ENST00000555259 OR52E5Q8NH55 327 aa6.55□□□□□ -1.36
SCFD1-215ENST00000555259 TMEM263Q8WUH6 116 aaKnown RBP6.55□□□□□ -1.36
SCFD1-215ENST00000555259 RRNAD1Q96FB5 475 aaKnown RBP6.55□□□□□ -1.36
SCFD1-215ENST00000555259 SLC25A39Q9BZJ4 359 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-215ENST00000555259 BOLA2-SMG1P6H3BVE0 249 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 PI3P19957 117 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 UCP1P25874 307 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 RND3P61587 244 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 LYZP61626 148 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 ZNF90Q03938 601 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 TRIM16LQ309B1 348 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 PPP1R14BQ96C90 147 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 SSR3Q9UNL2 185 aa6.54□□□□□ -1.36
SCFD1-215ENST00000555259 IGLV5-52A0A0A0MRZ9 124 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 GAGE7O76087 117 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 NXPH4O95158 308 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 PGAM2P15259 253 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 ZNF182P17025 639 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-215ENST00000555259 PIGPP57054 158 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 KLF9Q13886 244 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-215ENST00000555259 SPARTQ8N0X7 666 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 RNASE11Q8TAA1 199 aaKnown RBP6.53□□□□□ -1.36
SCFD1-215ENST00000555259 S100A16Q96FQ6 103 aaKnown RBP6.53□□□□□ -1.36
SCFD1-215ENST00000555259 VSIG2Q96IQ7 327 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 RSG1Q9BU20 258 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 FAM30AQ9NZY2 134 aa6.53□□□□□ -1.36
SCFD1-215ENST00000555259 IGKV1D-37A0A075B6S9 117 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 ZNF98A6NK75 572 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 ZFP92A6NM28 416 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 PRSS3P35030 304 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 RCVRNP35243 200 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 GALR1P47211 349 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 AQP4P55087 323 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 SP6Q3SY56 376 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 IGFL4Q6B9Z1 124 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 TMED4Q7Z7H5 227 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 LINC00528Q8N1L1 170 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 RNF182Q8N6D2 247 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.36
SCFD1-215ENST00000555259 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 SLC25A32Q9H2D1 315 aa6.52□□□□□ -1.36
SCFD1-215ENST00000555259 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.36
SCFD1-215ENST00000555259 LRP2P98164 4655 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 TRAV8-2A0A0B4J237 113 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 CEBPZOSA8MTT3 80 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 SNRPGP15A8MWD9 76 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 RLN2P04090 185 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 GAMTQ14353 236 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 NMSQ5H8A3 153 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 NOXA1Q86UR1 476 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 TMPRSS5Q9H3S3 457 aa6.52□□□□□ -1.37
SCFD1-215ENST00000555259 H7BYZ3 331 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 OXTP01178 125 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 RHOBP62745 196 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 OR2F1Q13607 317 aa6.51□□□□□ -1.37
SCFD1-215ENST00000555259 UBE2NLQ5JXB2 153 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms