RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 U3KQE9 123 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 DNHD1Q96M86 4753 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 NOTCH3Q9UM47 2321 aa12.48□□□□□ -0.41
SPTLC2-203ENST00000554901 ORM2P19652 201 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 EIF5AP63241 154 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 RPL7L1Q6DKI1 246 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 ADAMTSL5Q6ZMM2 481 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 OR1L4Q8NGR5 311 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 PFDN5Q99471 154 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 PSMG3Q9BT73 122 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 VSIRQ9H7M9 311 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 ZNF207O43670 478 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 C4BPBP20851 252 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 OR1B1Q8NGR6 318 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 DYNLRB2Q8TF09 96 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 GRAMD2BQ96HH9 432 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 RSG1Q9BU20 258 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 RHPN1-AS1Q9BWJ2 59 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 HIGD1AQ9Y241 93 aa12.47□□□□□ -0.41
SPTLC2-203ENST00000554901 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.41
SPTLC2-203ENST00000554901 CHEK1O14757 476 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 COX7A2P2O60397 106 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 IGLV1-51P01701 117 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 IGLL1P15814 213 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 SERF2P84101 59 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 OR2G3Q8NGZ4 309 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 GATAD1Q8WUU5 269 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 ARV1Q9H2C2 271 aa12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 ZMAT5Q9UDW3 170 aaKnown RBP12.46□□□□□ -0.42
SPTLC2-203ENST00000554901 BUB3O43684 328 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 OR5G3P0C626 314 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 ATP6V0CP27449 155 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 DEFB114Q30KQ6 69 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 C9orf62Q8N4C0 152 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 HSD17B11Q8NBQ5 300 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 DNAJC4Q9NNZ3 241 aa12.45□□□□□ -0.42
SPTLC2-203ENST00000554901 TRAV25A0A0B4J276 109 aa12.44□□□□□ -0.42
SPTLC2-203ENST00000554901 RNF2Q99496 336 aa12.44□□□□□ -0.42
SPTLC2-203ENST00000554901 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-203ENST00000554901 MLXQ9UH92 298 aa12.44□□□□□ -0.42
SPTLC2-203ENST00000554901 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 EDN2P20800 178 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 C10orf113Q5VZT2 155 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 LAMTOR1Q6IAA8 161 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 C16orf54Q6UWD8 224 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 TMEM37Q8WXS4 190 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 ST8SIA2Q92186 375 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 SHANK2-AS3Q9BTD1 123 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 SLC25A39Q9BZJ4 359 aaPredicted RBP12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 DOK5Q9P104 306 aa12.43□□□□□ -0.42
SPTLC2-203ENST00000554901 HELTA6NFD8 242 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 ZNF98A6NK75 572 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 H3BRN7 92 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 MBP02144 154 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 FFAR4Q5NUL3 377 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 SAMD5Q5TGI4 173 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 LCN12Q6JVE5 192 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 GPR82Q96P67 336 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 IGHV3-49A0A0A0MS15 119 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 M6PRP20645 277 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 ACOT6Q3I5F7 207 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 LINC00305Q7Z4B0 112 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 BAP18Q8IXM2 172 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 GLMPQ8WWB7 406 aa12.42□□□□□ -0.42
SPTLC2-203ENST00000554901 IGHV3OR16-13A0A075B7E8 117 aa12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 IGHV3-74A0A0B4J1X5 117 aa12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 SEC11BP0C7V7 166 aa12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 SPP1P10451 314 aa12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 CD300EQ496F6 205 aaPredicted RBP12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 RBPMS2Q6ZRY4 209 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 UHRF2Q96PU4 802 aa12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 MRPL32Q9BYC8 188 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-203ENST00000554901 TSPAN4O14817 238 aa12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 EGFEM1PQ0D2K5 195 aa12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 EIF5AL1Q6IS14 154 aaKnown RBP12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 TCF24Q7RTU0 167 aa12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 OR8I2Q8N0Y5 310 aa12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 SH3BGRL3Q9H299 93 aa12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
SPTLC2-203ENST00000554901 IGHV3-66A0A0C4DH42 116 aa12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 RPL7P18124 248 aaKnown RBP12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 RHOBP62745 196 aa12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 GCSAMLQ5JQS6 135 aa12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 FAM78BQ5VT40 261 aa12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms