RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 COX7A1P24310 79 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 TPPP3Q9BW30 176 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 MRPL27Q9P0M9 148 aaKnown RBP7.65□□□□□ -1.18
SYNE2-213ENST00000554805 CA7P43166 264 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 HBBP68871 147 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 PIP4P1Q86T03 277 aa7.65□□□□□ -1.18
SYNE2-213ENST00000554805 ALKBH7Q9BT30 221 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-213ENST00000554805 RPP21Q9H633 154 aaKnown RBP7.65□□□□□ -1.18
SYNE2-213ENST00000554805 IGKV1D-37A0A075B6S9 117 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 PSMB11A5LHX3 300 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 COL8A1P27658 744 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 PRNTQ86SH4 94 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 OR4A5Q8NH83 315 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 LINC00574Q9H8X3 128 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 MALRD1Q5VYJ5 2156 aa7.65□□□□□ -1.19
SYNE2-213ENST00000554805 C20orf202A1L168 122 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 TMEM178BH3BS89 294 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 MC5RP33032 325 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 PTTG1IPP53801 180 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 EBLN2Q6P2I7 272 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 Q6ZVH6 145 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 Q9H3A6 140 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 TRAV9-2A0A087WT02 112 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 CGB1A6NKQ9 187 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 C22orf46C9J442 243 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 CNTFRP26992 372 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 CTRLP40313 264 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 SSX8Q7RTT4 187 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 MBD6Q96DN6 1003 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 INSIG2Q9Y5U4 225 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 TANC2Q9HCD6 1990 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 CNIH1O95406 144 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 TSPOP30536 169 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 RASL11AQ6T310 242 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 UNQ5815/PRO19632Q6UWF5 114 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 ZNF841Q6ZN19 808 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 GOLT1AQ6ZVE7 132 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 FAM57AQ8TBR7 257 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 HIGD1AQ9Y241 93 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 ZFP30Q9Y2G7 519 aa7.64□□□□□ -1.19
SYNE2-213ENST00000554805 ANKHD1Q8IWZ3 2542 aaKnown RBP7.63□□□□□ -1.19
SYNE2-213ENST00000554805 CENPEQ02224 2701 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 LGALS7P47929 136 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 C3orf36Q3SXR2 165 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 RUSC1-AS1Q66K80 236 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 Q6ZS92 163 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 KIR3DL3Q8N743 410 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 THAP8Q8NA92 274 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 ASCL2Q99929 193 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 HSBP1L1C9JCN9 74 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 FAM162BQ5T6X4 162 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 ZNF596Q8TC21 504 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 WIPF2Q8TF74 440 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-213ENST00000554805 TMEM70Q9BUB7 260 aa7.63□□□□□ -1.19
SYNE2-213ENST00000554805 IGLV2-23P01705 113 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 CEACAM8P31997 349 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-213ENST00000554805 ZNF138P52744 262 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-213ENST00000554805 EXOC3-AS1Q8N2X6 119 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-213ENST00000554805 NUP37Q8NFH4 326 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 FBXL15Q9H469 300 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 CTSZQ9UBR2 303 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.62□□□□□ -1.19
SYNE2-213ENST00000554805 A0A0G2JNJ9 132 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 OR4C46A6NHA9 309 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 LEPROTL1O95214 131 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 TCRAP04437 139 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 IGLL1P15814 213 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 HTR1DP28221 377 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 GFRALQ6UXV0 394 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 ERASQ7Z444 233 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 MCRIP2Q9BUT9 160 aaKnown RBP7.62□□□□□ -1.19
SYNE2-213ENST00000554805 Q9UFV3 132 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 VWC2LB2RUY7 222 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 LYNX1G3V0Z9 82 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 LINC00614P0C842 121 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 IGHV1-8P0DP01 117 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 LYNX1P0DP58 116 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 LOXP28300 417 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-213ENST00000554805 ATP5L2Q7Z4Y8 100 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 RPEQ96AT9 228 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 TRGV9Q99603 122 aa7.62□□□□□ -1.19
SYNE2-213ENST00000554805 FAM208BQ5VWN6 2430 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 DSCAML1Q8TD84 2053 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 IGLC7A0M8Q6 106 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 CEACAM4O75871 244 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 RASL11BQ9BPW5 248 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 TMEM133Q9H2Q1 129 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 FCN3O75636 299 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 VAMP3Q15836 100 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 RBPMS2Q6ZRY4 209 aaKnown RBP7.61□□□□□ -1.19
SYNE2-213ENST00000554805 LINC00173Q6ZV60 143 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 OR8B3Q8NGG8 313 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 SRSF12Q8WXF0 261 aaKnown RBP7.61□□□□□ -1.19
SYNE2-213ENST00000554805 FMC1Q96HJ9 113 aa7.61□□□□□ -1.19
SYNE2-213ENST00000554805 PMCHL2Q9BQD1 86 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms