RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 M0QZ24 198 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 ORM2P19652 201 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 GATA2P23769 480 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-210ENST00000553950 SULT1A2P50226 295 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 KRTAP10-3P60369 221 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 C18orf65Q6ZTR6 163 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 GRAMD2BQ96HH9 432 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 RAX2Q96IS3 184 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 C20orf24Q9BUV8 137 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
SHMT2-210ENST00000553950 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 NPPCP23582 126 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-210ENST00000553950 USF2Q15853 346 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-210ENST00000553950 ALKAL2Q6UX46 152 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 OR10G4Q8NGN3 311 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 OR10G9Q8NGN4 311 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 OR10G7Q8NGN6 311 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 GPR82Q96P67 336 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 ACTR3CQ9C0K3 210 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-210ENST00000553950 DOK5Q9P104 306 aa11.12□□□□□ -0.63
SHMT2-210ENST00000553950 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 CTXND1A0A1B0GTU2 59 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 RAB2AP61019 212 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 KLF5Q13887 457 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-210ENST00000553950 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 ZNF680Q8NEM1 530 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 STXBP6Q8NFX7 210 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
SHMT2-210ENST00000553950 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
SHMT2-210ENST00000553950 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
SHMT2-210ENST00000553950 H3BRN7 92 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 CD5P06127 495 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 CRYBB3P26998 211 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 SLURP1P55000 103 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 C1orf194Q5T5A4 169 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 FAM122CQ6P4D5 195 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 OR9G4Q8NGQ1 327 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 FAM213BQ8TBF2 198 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 SAT2Q96F10 170 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-210ENST00000553950 SHANK2-AS3Q9BTD1 123 aa11.1□□□□□ -0.63
SHMT2-210ENST00000553950 SLC25A39Q9BZJ4 359 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-210ENST00000553950 OVOL1O14753 267 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 HBE1P02100 147 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 RAB14P61106 215 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 BLOC1S1P78537 153 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 RPRMQ9NS64 109 aa11.09□□□□□ -0.63
SHMT2-210ENST00000553950 TECRQ9NZ01 308 aaKnown RBP11.09□□□□□ -0.63
SHMT2-210ENST00000553950 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
SHMT2-210ENST00000553950 ZNF705EA8MWA4 302 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-210ENST00000553950 C8orf88P0DMB2 117 aa11.08□□□□□ -0.64
SHMT2-210ENST00000553950 RPL7P18124 248 aaKnown RBP11.08□□□□□ -0.64
SHMT2-210ENST00000553950 MEOX2P50222 304 aa11.08□□□□□ -0.64
SHMT2-210ENST00000553950 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.64
SHMT2-210ENST00000553950 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
SHMT2-210ENST00000553950 TMEM213A2RRL7 107 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 MAP1LC3B2A6NCE7 125 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 HELTA6NFD8 242 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 ZNF98A6NK75 572 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 KRTAP21-3Q3LHN1 58 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 FAM74A1Q5RGS3 127 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 PATE2Q6UY27 113 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 BPIFA4PQ86YQ2 179 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 RPP25LQ8N5L8 163 aaKnown RBP11.07□□□□□ -0.64
SHMT2-210ENST00000553950 DLX4Q92988 240 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-210ENST00000553950 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 DUX3Q96PT4 197 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 MAP1LC3BQ9GZQ8 125 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 VSIRQ9H7M9 311 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
SHMT2-210ENST00000553950 SIGLEC8Q9NYZ4 499 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 WNK1Q9H4A3 2382 aa11.07□□□□□ -0.64
SHMT2-210ENST00000553950 RGS13O14921 159 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 BUB3O43684 328 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 OR7C2O60412 319 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 CXorf1O96002 111 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 H2AFB1P0C5Y9 115 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 GALR1P47211 349 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 PPT1P50897 306 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 DYNLRB2Q8TF09 96 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 MCRIP2Q9BUT9 160 aaKnown RBP11.06□□□□□ -0.64
SHMT2-210ENST00000553950 SCRT1Q9BWW7 348 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms