RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 C17orf112F2Z3M2 114 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 WIPF1O43516 503 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 PFDN1O60925 122 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 BMI1P35226 326 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 B2MP61769 119 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 PXDC1Q5TGL8 231 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 RPL7L1Q6DKI1 246 aaKnown RBP9.26□□□□□ -0.93
SHMT2-209ENST00000553949 Q6ZRG5 221 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 TMUB2Q71RG4 321 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 ST8SIA2Q92186 375 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 NARS2Q96I59 477 aaKnown RBP9.26□□□□□ -0.93
SHMT2-209ENST00000553949 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 VSIRQ9H7M9 311 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 CYTL1Q9NRR1 136 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 KCNIP2Q9NS61 270 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 TECRQ9NZ01 308 aaKnown RBP9.26□□□□□ -0.93
SHMT2-209ENST00000553949 SELENOKQ9Y6D0 94 aa9.26□□□□□ -0.93
SHMT2-209ENST00000553949 KANTRA0A1W2PQU2 76 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 G3V4G9 280 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 BCL2L11O43521 198 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 BUB3O43684 328 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 COX7A2P2O60397 106 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 JTBO76095 146 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 OR5G3P0C626 314 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 LGALSLQ3ZCW2 172 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-209ENST00000553949 CD300EQ496F6 205 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-209ENST00000553949 PATE2Q6UY27 113 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 HSD17B11Q8NBQ5 300 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 PPP1R14BQ96C90 147 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 RNF2Q99496 336 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 TMEM231Q9H6L2 316 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 PFDN2Q9UHV9 154 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 HIGD1AQ9Y241 93 aa9.25□□□□□ -0.93
SHMT2-209ENST00000553949 ELOA3CA0A087WX78 387 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-209ENST00000553949 ATP6V0CP27449 155 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 S100A7P31151 101 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 OR1L4Q8NGR5 311 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 OR2K2Q8NGT1 345 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 TMEM37Q8WXS4 190 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 ARV1Q9H2C2 271 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 TIMM9Q9Y5J7 89 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 RFNGQ9Y644 331 aa9.24□□□□□ -0.93
SHMT2-209ENST00000553949 ZNF98A6NK75 572 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 H3BRN7 92 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 FFAR4Q5NUL3 377 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 C16orf54Q6UWD8 224 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 TCF24Q7RTU0 167 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 LINC00305Q7Z4B0 112 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 S100A7AQ86SG5 101 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 TMEM61Q8N0U2 210 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 C9orf62Q8N4C0 152 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 GNPNAT1Q96EK6 184 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-209ENST00000553949 UHRF2Q96PU4 802 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 PFDN5Q99471 154 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-209ENST00000553949 SHANK2-AS3Q9BTD1 123 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 SCRT1Q9BWW7 348 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 SLC25A39Q9BZJ4 359 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-209ENST00000553949 SH3BGRL3Q9H299 93 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
SHMT2-209ENST00000553949 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 TRAV25A0A0B4J276 109 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 CD5P06127 495 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 NKX2-5P52952 324 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-209ENST00000553949 EGFEM1PQ0D2K5 195 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 C1orf194Q5T5A4 169 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 FAM90A2PQ658T7 463 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 LAMTOR1Q6IAA8 161 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 LCN12Q6JVE5 192 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
SHMT2-209ENST00000553949 OR2G3Q8NGZ4 309 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 GATAD1Q8WUU5 269 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 GLMPQ8WWB7 406 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 ZNF471Q9BX82 626 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-209ENST00000553949 SLC25A22Q9H936 323 aa9.22□□□□□ -0.93
SHMT2-209ENST00000553949 HELTA6NFD8 242 aa9.21□□□□□ -0.94
SHMT2-209ENST00000553949 KRTAP10-11P60412 298 aa9.21□□□□□ -0.94
SHMT2-209ENST00000553949 RPL11P62913 178 aaKnown RBP9.21□□□□□ -0.94
SHMT2-209ENST00000553949 KPRPQ5T749 579 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-209ENST00000553949 LEMD1Q68G75 181 aa9.21□□□□□ -0.94
SHMT2-209ENST00000553949 OR8I2Q8N0Y5 310 aa9.21□□□□□ -0.94
SHMT2-209ENST00000553949 SLC25A32Q9H2D1 315 aa9.21□□□□□ -0.94
SHMT2-209ENST00000553949 ZMAT5Q9UDW3 170 aaKnown RBP9.21□□□□□ -0.94
SHMT2-209ENST00000553949 ZNF785A8K8V0 405 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 TSPAN4O14817 238 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 EIF5AP63241 154 aaKnown RBP9.2□□□□□ -0.94
SHMT2-209ENST00000553949 SERF2P84101 59 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 GUCA2BQ16661 112 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 ACOT6Q3I5F7 207 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-209ENST00000553949 FAM78BQ5VT40 261 aa9.2□□□□□ -0.94
SHMT2-209ENST00000553949 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms