RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 FAM24BQ8N5W8 94 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 TMEM147Q9BVK8 224 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 MED28Q9H204 178 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 MAP6D1Q9H9H5 199 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 UQCC1Q9NVA1 299 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 UBE2L5PA0A1B0GUS4 154 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 CXCL3P19876 107 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 SELENOTP62341 195 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 HBG1P69891 147 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 HBG2P69892 147 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 ZNF124Q15973 351 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 LINC00322Q6ZN03 302 aaPredicted RBP16.95■□□□□ 0.3
TDP1-206ENST00000553569 FAM110AQ9BQ89 295 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 ZMAT4Q9H898 229 aa16.95■□□□□ 0.3
TDP1-206ENST00000553569 K7EQG2 157 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 S100A11P31949 105 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 AP2S1P53680 142 aaPredicted RBP16.94■□□□□ 0.3
TDP1-206ENST00000553569 EWSR1Q01844 656 aaKnown RBP eCLIP16.94■□□□□ 0.3
TDP1-206ENST00000553569 FCN2Q15485 313 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 ZNF546Q86UE3 836 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 MGST2Q99735 147 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 GGTLC1Q9BX51 225 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 SLC25A31Q9H0C2 315 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 U3KQK5 164 aa16.94■□□□□ 0.3
TDP1-206ENST00000553569 LOC102724200A0A096LPH7 203 aaPredicted RBP16.93■□□□□ 0.3
TDP1-206ENST00000553569 AGPAT2O15120 278 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 MPC2O95563 127 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 PET100P0DJ07 73 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 CMC4P56277 68 aaPredicted RBP16.93■□□□□ 0.3
TDP1-206ENST00000553569 DEFB131AP59861 70 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 DCANP1Q8TF63 244 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 TM2D3Q9BRN9 247 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 SLC25A22Q9H936 323 aa16.93■□□□□ 0.3
TDP1-206ENST00000553569 ZNF688P0C7X2 276 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 NHLH2Q02577 135 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 BAXQ07812 192 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 OR8I2Q8N0Y5 310 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 OR11H7Q8NGC8 314 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 MBD2Q9UBB5 411 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 SLC45A2Q9UMX9 530 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 HIGD1AQ9Y241 93 aa16.92■□□□□ 0.3
TDP1-206ENST00000553569 HYPMO75409 117 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 OR5G3P0C626 314 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 RPL35AP18077 110 aaKnown RBP16.91■□□□□ 0.3
TDP1-206ENST00000553569 RAP2BP61225 183 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 OXA1LQ15070 435 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 VWC2Q2TAL6 325 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 C1orf194Q5T5A4 169 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 LEMD1Q68G75 181 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 RCHY1Q96PM5 261 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 RNF126Q9BV68 326 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 SCRT1Q9BWW7 348 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 ARL6Q9H0F7 186 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 RETNQ9HD89 108 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 NRN1Q9NPD7 142 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 FBXL17Q9UF56 701 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 WDR83OSQ9Y284 106 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 COL7A1Q02388 2944 aa16.91■□□□□ 0.3
TDP1-206ENST00000553569 ZNF98A6NK75 572 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 FGF7P21781 194 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 CAMLGP49069 296 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 RAB31Q13636 194 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 ATP6V1FQ16864 119 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 OR5C1Q8NGR4 320 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 SPATA25Q9BR10 227 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 SLC25A32Q9H2D1 315 aa16.9■□□□□ 0.3
TDP1-206ENST00000553569 H3BRN7 92 aa16.89■□□□□ 0.29
TDP1-206ENST00000553569 S100A7P31151 101 aa16.89■□□□□ 0.29
TDP1-206ENST00000553569 PLP1P60201 277 aa16.89■□□□□ 0.29
TDP1-206ENST00000553569 CLINT1Q14677 625 aa16.89■□□□□ 0.29
TDP1-206ENST00000553569 UHRF2Q96PU4 802 aa16.89■□□□□ 0.29
TDP1-206ENST00000553569 SLC25A39Q9BZJ4 359 aaPredicted RBP16.89■□□□□ 0.29
TDP1-206ENST00000553569 MIC13Q5XKP0 118 aa16.88■□□□□ 0.29
TDP1-206ENST00000553569 SHANK2-AS3Q9BTD1 123 aa16.88■□□□□ 0.29
TDP1-206ENST00000553569 GALR1P47211 349 aa16.87■□□□□ 0.29
TDP1-206ENST00000553569 PSMG4Q5JS54 123 aa16.87■□□□□ 0.29
TDP1-206ENST00000553569 COX7A2P2O60397 106 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 APOC4P55056 127 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 SNRPD3P62318 126 aaKnown RBP16.86■□□□□ 0.29
TDP1-206ENST00000553569 PXDC1Q5TGL8 231 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 PATE2Q6UY27 113 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 THAP6Q8TBB0 222 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 ARV1Q9H2C2 271 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 HSPB11Q9Y547 144 aa16.86■□□□□ 0.29
TDP1-206ENST00000553569 RPL12P30050 165 aaKnown RBP16.85■□□□□ 0.29
TDP1-206ENST00000553569 OPCMLQ14982 345 aa16.85■□□□□ 0.29
TDP1-206ENST00000553569 HUWE1Q7Z6Z7 4374 aaKnown RBP16.84■□□□□ 0.29
TDP1-206ENST00000553569 KNCNA6PVL3 124 aa16.84■□□□□ 0.29
TDP1-206ENST00000553569 S100A7AQ86SG5 101 aa16.84■□□□□ 0.29
TDP1-206ENST00000553569 RSG1Q9BU20 258 aa16.84■□□□□ 0.29
TDP1-206ENST00000553569 SMIM3Q9BZL3 60 aa16.84■□□□□ 0.29
TDP1-206ENST00000553569 GIPP09681 153 aaPredicted RBP16.83■□□□□ 0.28
TDP1-206ENST00000553569 B2MP61769 119 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 PRR20EP86478 221 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 PRR20CP86479 221 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 PRR20DP86480 221 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 PRR20BP86481 221 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 PRR20AP86496 221 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 Q6ZRG5 221 aa16.83■□□□□ 0.28
TDP1-206ENST00000553569 LINC00305Q7Z4B0 112 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms