RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 HSPB11Q9Y547 144 aa17.57■□□□□ 0.4
TDP1-205ENST00000553527 LOC102724200A0A096LPH7 203 aaPredicted RBP17.56■□□□□ 0.4
TDP1-205ENST00000553527 UBE2L5PA0A1B0GUS4 154 aa17.56■□□□□ 0.4
TDP1-205ENST00000553527 DFFBO76075 338 aa17.56■□□□□ 0.4
TDP1-205ENST00000553527 TEPPQ6URK8 271 aa17.56■□□□□ 0.4
TDP1-205ENST00000553527 METTL26Q96S19 204 aa17.56■□□□□ 0.4
TDP1-205ENST00000553527 G3V3Q6 166 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 SMLR1H3BR10 107 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 PSG1P11464 419 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 CLINT1Q14677 625 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 VWC2Q2TAL6 325 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 ODF3L2Q3SX64 289 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 FAM90A2PQ658T7 463 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 GGTLC1Q9BX51 225 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 VSIRQ9H7M9 311 aa17.55■□□□□ 0.4
TDP1-205ENST00000553527 IL4P05112 153 aa17.54■□□□□ 0.4
TDP1-205ENST00000553527 PAFAH1B2P68402 229 aa17.54■□□□□ 0.4
TDP1-205ENST00000553527 OR2F1Q13607 317 aa17.54■□□□□ 0.4
TDP1-205ENST00000553527 APRG1Q8IVJ8 170 aa17.54■□□□□ 0.4
TDP1-205ENST00000553527 INO80EQ8NBZ0 244 aaPredicted RBP17.54■□□□□ 0.4
TDP1-205ENST00000553527 OR51G1Q8NGK1 321 aa17.54■□□□□ 0.4
TDP1-205ENST00000553527 A0A1B0GVG6 124 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 DNASE2O00115 360 aaPredicted RBP17.53■□□□□ 0.4
TDP1-205ENST00000553527 CYP2G1PQ6ZSU1 146 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 ZNF546Q86UE3 836 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 MUC7Q8TAX7 377 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 AQP10Q96PS8 301 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 SMIM3Q9BZL3 60 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 TMEM231Q9H6L2 316 aa17.53■□□□□ 0.4
TDP1-205ENST00000553527 A0A1W2PS18 150 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 RPL35AP18077 110 aaKnown RBP17.52■□□□□ 0.4
TDP1-205ENST00000553527 ZNF124Q15973 351 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 BPIFCQ8NFQ6 507 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 RNF125Q96EQ8 232 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 NARS2Q96I59 477 aaKnown RBP17.52■□□□□ 0.4
TDP1-205ENST00000553527 ATP5SQ99766 215 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 MS4A6AQ9H2W1 248 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 WDR83OSQ9Y284 106 aa17.52■□□□□ 0.4
TDP1-205ENST00000553527 CFDP00746 253 aaPredicted RBP17.51■□□□□ 0.39
TDP1-205ENST00000553527 FGF7P21781 194 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 CRYBB3P26998 211 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 LYZP61626 148 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 SELENOTP62341 195 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 RAB31Q13636 194 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 AKAP14Q86UN6 197 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 ST6GAL2Q96JF0 529 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 MGST2Q99735 147 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 PBDC1Q9BVG4 233 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 RABAC1Q9UI14 185 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 TNFSF18Q9UNG2 199 aa17.51■□□□□ 0.39
TDP1-205ENST00000553527 C3orf84H3BNL1 204 aa17.5■□□□□ 0.39
TDP1-205ENST00000553527 AGPAT2O15120 278 aa17.5■□□□□ 0.39
TDP1-205ENST00000553527 CD5P06127 495 aa17.5■□□□□ 0.39
TDP1-205ENST00000553527 GATA2P23769 480 aaPredicted RBP17.5■□□□□ 0.39
TDP1-205ENST00000553527 USF2Q15853 346 aaPredicted RBP17.5■□□□□ 0.39
TDP1-205ENST00000553527 EDA2RQ9HAV5 297 aa17.5■□□□□ 0.39
TDP1-205ENST00000553527 CAMLGP49069 296 aa17.49■□□□□ 0.39
TDP1-205ENST00000553527 FBXL17Q9UF56 701 aa17.49■□□□□ 0.39
TDP1-205ENST00000553527 RNF222A6NCQ9 220 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 ARPC5O15511 151 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 MPDU1O75352 247 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 HNRNPCP07910 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
TDP1-205ENST00000553527 LINC00869P0C866 280 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 CMC4P56277 68 aaPredicted RBP17.48■□□□□ 0.39
TDP1-205ENST00000553527 TMEM182Q6ZP80 229 aaPredicted RBP17.48■□□□□ 0.39
TDP1-205ENST00000553527 TCTE3Q8IZS6 198 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 STXBP6Q8NFX7 210 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 GRAMD2BQ96HH9 432 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 MAP6D1Q9H9H5 199 aa17.48■□□□□ 0.39
TDP1-205ENST00000553527 AP2S1P53680 142 aaPredicted RBP17.47■□□□□ 0.39
TDP1-205ENST00000553527 APOC4P55056 127 aa17.47■□□□□ 0.39
TDP1-205ENST00000553527 ZFAND6Q6FIF0 208 aa17.47■□□□□ 0.39
TDP1-205ENST00000553527 SLC45A2Q9UMX9 530 aa17.47■□□□□ 0.39
TDP1-205ENST00000553527 IFNA5P01569 189 aa17.46■□□□□ 0.39
TDP1-205ENST00000553527 FAM24BQ8N5W8 94 aa17.46■□□□□ 0.39
TDP1-205ENST00000553527 NPCDR1Q9BY65 106 aa17.46■□□□□ 0.39
TDP1-205ENST00000553527 WDR61Q9GZS3 305 aaKnown RBP17.46■□□□□ 0.39
TDP1-205ENST00000553527 ORM2P19652 201 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 EIF2B2P49770 351 aaKnown RBP17.45■□□□□ 0.38
TDP1-205ENST00000553527 DEFB131AP59861 70 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 OPCMLQ14982 345 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 LEMD1Q68G75 181 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 OR1B1Q8NGR6 318 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 MFFQ9GZY8 342 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 DOK5Q9P104 306 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 PFDN2Q9UHV9 154 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 U3KQE9 123 aa17.45■□□□□ 0.38
TDP1-205ENST00000553527 CASC10Q5T4H9 136 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 C16orf54Q6UWD8 224 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 STPG3Q8N7X2 389 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 OR11H4Q8NGC9 324 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 SCGB1C1Q8TD33 95 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 PPP1R14BQ96C90 147 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 OVOL2Q9BRP0 275 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 WFDC1Q9HC57 220 aa17.44■□□□□ 0.38
TDP1-205ENST00000553527 AGRNO00468 2067 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 HMSDA8MTL9 139 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 ZNF266Q14584 549 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 DEFB135Q30KP9 77 aa17.43■□□□□ 0.38
TDP1-205ENST00000553527 MIC13Q5XKP0 118 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms