RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 HBG2P69892 147 aa13.73□□□□□ -0.21
PRPF40B-216ENST00000552301 ARL16Q0P5N6 197 aa13.73□□□□□ -0.21
PRPF40B-216ENST00000552301 APRG1Q8IVJ8 170 aa13.73□□□□□ -0.21
PRPF40B-216ENST00000552301 OR1B1Q8NGR6 318 aa13.73□□□□□ -0.21
PRPF40B-216ENST00000552301 CITED4Q96RK1 184 aa13.73□□□□□ -0.21
PRPF40B-216ENST00000552301 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
PRPF40B-216ENST00000552301 K7EQG2 157 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 LINC00869P0C866 280 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 SULT1A1P50225 295 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 DEFB131AP59861 70 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 RAP2BP61225 183 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 RAB31Q13636 194 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 C1orf194Q5T5A4 169 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 TMEM252Q8N6L7 170 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 WWC2-AS2Q96NR7 200 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 DOK5Q9P104 306 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 ALG5Q9Y673 324 aa13.72□□□□□ -0.21
PRPF40B-216ENST00000552301 IGSF23A1L1A6 192 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 E5RGE8 158 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 ZNF688P0C7X2 276 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 PET100P0DJ07 73 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 RPL35AP18077 110 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 S100A7AQ86SG5 101 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 SLC25A31Q9H0C2 315 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 UQCC1Q9NVA1 299 aa13.71□□□□□ -0.21
PRPF40B-216ENST00000552301 HYPMO75409 117 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 OR5G3P0C626 314 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 S100A11P31949 105 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 H2BFSP57053 126 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 SNRPD3P62318 126 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 LEMD1Q68G75 181 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 TMEM182Q6ZP80 229 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 FAM24BQ8N5W8 94 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 DCANP1Q8TF63 244 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 PPP1R1CQ8WVI7 109 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 SLC25A22Q9H936 323 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
PRPF40B-216ENST00000552301 UBE2L5PA0A1B0GUS4 154 aa13.69□□□□□ -0.22
PRPF40B-216ENST00000552301 GALR1P47211 349 aa13.69□□□□□ -0.22
PRPF40B-216ENST00000552301 ZNF124Q15973 351 aa13.69□□□□□ -0.22
PRPF40B-216ENST00000552301 RGS21Q2M5E4 152 aa13.69□□□□□ -0.22
PRPF40B-216ENST00000552301 RETNQ9HD89 108 aa13.69□□□□□ -0.22
PRPF40B-216ENST00000552301 KIR2DL5BA0A0G2JN68 375 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 KIR2DL5BA0A0G2JPC4 375 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 ZNF98A6NK75 572 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 AGPAT2O15120 278 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 BAXQ07812 192 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 ATP6V1FQ16864 119 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 KIR2DL5AQ8N109 375 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 STPG3Q8N7X2 389 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 KIR2DL5BQ8NHK3 375 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 MED28Q9H204 178 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 OR5AC2Q9NZP5 309 aa13.68□□□□□ -0.22
PRPF40B-216ENST00000552301 UBE2CO00762 179 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 CAMLGP49069 296 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 PLP1P60201 277 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 PSMG4Q5JS54 123 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 PXDC1Q5TGL8 231 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 STHQ8IWL8 128 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 GPR82Q96P67 336 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 ARL6Q9H0F7 186 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 RNF24Q9Y225 148 aa13.67□□□□□ -0.22
PRPF40B-216ENST00000552301 COL7A1Q02388 2944 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 H3BRN7 92 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 ID1P41134 155 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 EWSR1Q01844 656 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 MGST2Q99735 147 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 SHANK2-AS3Q9BTD1 123 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 SCRT1Q9BWW7 348 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 SLC25A39Q9BZJ4 359 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 SLC25A32Q9H2D1 315 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 SEPSECSQ9HD40 501 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 WDR83OSQ9Y284 106 aa13.66□□□□□ -0.22
PRPF40B-216ENST00000552301 H0YIZ8 118 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 COX7A2P2O60397 106 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 MPC2O95563 127 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 FGF7P21781 194 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 MEOX2P50222 304 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 VWC2Q2TAL6 325 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
PRPF40B-216ENST00000552301 RPL7P18124 248 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 ATF4P18848 351 aaPredicted RBP13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 Q6ZRG5 221 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 Q6ZWC4 215 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 OR5C1Q8NGR4 320 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 UHRF2Q96PU4 802 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 ARV1Q9H2C2 271 aa13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 HUWE1Q7Z6Z7 4374 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-216ENST00000552301 KMT2CQ8NEZ4 4911 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 KNCNA6PVL3 124 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 PSMB3P49720 205 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 NHLH2Q02577 135 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 CLINT1Q14677 625 aa13.63□□□□□ -0.23
PRPF40B-216ENST00000552301 ACTL10Q5JWF8 245 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms